Miyakogusa Predicted Gene
- Lj4g3v1983590.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1983590.2 Non Chatacterized Hit- tr|B8B9E9|B8B9E9_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,56.14,0.00000000003,TRANSMEMBRANE 9 SUPERFAMILY PROTEIN,NULL;
TRANSMEMBRANE 9 SUPERFAMILY PROTEIN,Nonaspanin (TM9SF);
EM,CUFF.50136.2
(789 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP033741 homologue to UniRef100_A7PFR7 Cluster: Chromos... 119 3e-26
gnl|LJGI|FS324322 similar to UniRef100_A7P650 Cluster: Chromosom... 56 3e-07
gnl|LJGI|TC58376 similar to UniRef100_A7P650 Cluster: Chromosome... 56 3e-07
>gnl|LJGI|BP033741 homologue to UniRef100_A7PFR7 Cluster: Chromosome chr11
scaffold_14, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_14, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 526
Score = 119 bits (60), Expect = 3e-26
Identities = 123/144 (85%)
Strand = Plus / Plus
Query: 137 tgaaggtgaacaaactgacttccacaaaaacacagcttccctactcatactattcactgc 196
|||| ||||||||| | |||| ||||||||||||||||| ||||| |||||||||||||
Sbjct: 88 tgaaagtgaacaaattatcttctacaaaaacacagcttccttactcctactattcactgc 147
Query: 197 cttattgtcagccaaatcgcattgtcgacggtgcagaaaatctaggggaagttctccggg 256
||||||||| ||| ||| ||||| ||| |||| || ||||| || |||||||| ||||
Sbjct: 148 cttattgtcgtccagatcagattgttgacagtgctgagaatcttggcgaagttcttcggg 207
Query: 257 gtgaccgcattgagaactctcctt 280
| ||||||||||| ||||||||||
Sbjct: 208 gcgaccgcattgaaaactctcctt 231
Score = 111 bits (56), Expect = 7e-24
Identities = 83/92 (90%)
Strand = Plus / Plus
Query: 289 aaaatgagagaacctcagatgtgcaatgttgtttgccgtataactcttactgcaaaaaca 348
|||||||| || || |||||||||||||||||||| ||| ||||||||| ||||| ||||
Sbjct: 332 aaaatgagggagccacagatgtgcaatgttgtttgtcgtctaactcttaatgcaacaaca 391
Query: 349 gccaaagagttcaaggaaaagatcaatgatga 380
||||||||||||||||||||||| |||||||
Sbjct: 392 gccaaagagttcaaggaaaagatagatgatga 423
>gnl|LJGI|FS324322 similar to UniRef100_A7P650 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 706
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 227 gtgcagaaaatctaggggaagttctccggggtgaccgcattgagaactctccttttgtgt 286
|||| |||||||| |||||||| || || || ||||||||||| || |||| || |||||
Sbjct: 341 gtgctgaaaatcttggggaagtgcttcgtggggaccgcattgaaaattctcgttatgtgt 400
Query: 287 ttaaaatg 294
||||||||
Sbjct: 401 ttaaaatg 408
>gnl|LJGI|TC58376 similar to UniRef100_A7P650 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (97%)
Length = 2158
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 227 gtgcagaaaatctaggggaagttctccggggtgaccgcattgagaactctccttttgtgt 286
|||| |||||||| |||||||| || || || ||||||||||| || |||| || |||||
Sbjct: 277 gtgctgaaaatcttggggaagtgcttcgtggggaccgcattgaaaattctcgttatgtgt 336
Query: 287 ttaaaatg 294
||||||||
Sbjct: 337 ttaaaatg 344
Score = 54.0 bits (27), Expect = 1e-06
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 710 ctcctcaagaggttgaagacgagaaggaaatcatttttacctatgatgtagagtttgagg 769
||||||||||||||||||| | |||||||| || || || |||||||| || || |||
Sbjct: 763 ctcctcaagaggttgaagagaacaaggaaattatcttcacatatgatgttgatttccagg 822
Query: 770 ccagtgatgtgaagtgggc 788
|||||||||||||||||
Sbjct: 823 agagtgatgtgaagtgggc 841