Miyakogusa Predicted Gene
- Lj4g3v1983530.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1983530.1 tr|B9I163|B9I163_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_234796
PE=4,35.81,0.00000000000002,DNA binding domain,DNA-binding WRKY; WRKY
DNA-binding domain,DNA-binding WRKY; WRKY,DNA-binding
WRKY,CUFF.50047.1
(1527 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC600169 similar to UniRef100_Q29B98 Cluster: GA18923-P... 650 0.0
gnl|LJGI|TC66806 similar to UniRef100_A7LHG7 Cluster: WRKY24; n=... 335 5e-91
gnl|LJGI|TC72364 weakly similar to UniRef100_A7LHI1 Cluster: WRK... 176 3e-43
gnl|LJGI|BP086025 UniRef100_A7PFS4 Cluster: Chromosome chr11 sca... 139 6e-32
gnl|LJGI|TC75441 similar to UniRef100_A7PFS4 Cluster: Chromosome... 117 2e-25
>gnl|LJGI|DC600169 similar to UniRef100_Q29B98 Cluster: GA18923-PA; n=1; Drosophila
pseudoobscura|Rep: GA18923-PA - Drosophila pseudoobscura
(Fruit fly), partial (7%)
Length = 563
Score = 650 bits (328), Expect = 0.0
Identities = 328/328 (100%)
Strand = Plus / Plus
Query: 1 atggctgagcatcgtcgcagctctgatgctgtcacagcgggagcaccagagcatcctcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 atggctgagcatcgtcgcagctctgatgctgtcacagcgggagcaccagagcatcctcac 194
Query: 61 cggagaagaaaggatttagaaggtgatggtggaagccgtgtagatgaagaagggaaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 cggagaagaaaggatttagaaggtgatggtggaagccgtgtagatgaagaagggaaggaa 254
Query: 121 gaaatggaagaggttgatgaacgagttggtgaatcgctggctgtcactgagttgcaaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gaaatggaagaggttgatgaacgagttggtgaatcgctggctgtcactgagttgcaaggc 314
Query: 181 ggcgagttaaggagttctgatgaacttccggtggagtccaatttagtaaccctagctgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ggcgagttaaggagttctgatgaacttccggtggagtccaatttagtaaccctagctgct 374
Query: 241 gtaccatcttccgccgtgcagcatcagagtgctgatttgcaggggagctctgctacattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gtaccatcttccgccgtgcagcatcagagtgctgatttgcaggggagctctgctacattg 434
Query: 301 aactcgagtggcaatgtcgaaagtaagg 328
||||||||||||||||||||||||||||
Sbjct: 435 aactcgagtggcaatgtcgaaagtaagg 462
>gnl|LJGI|TC66806 similar to UniRef100_A7LHG7 Cluster: WRKY24; n=1; Glycine max|Rep:
WRKY24 - Glycine max (Soybean), partial (49%)
Length = 732
Score = 335 bits (169), Expect = 5e-91
Identities = 280/317 (88%)
Strand = Plus / Plus
Query: 988 gagccagagcaaaaacgaagaatgaagaaaagtgacttaacaaacttggattctcctgta 1047
|||||||||| ||| |||||||||||||| ||| | |||| ||||||||| || ||
Sbjct: 225 gagccagagctgaaaagaagaatgaagaaagatgattcaacatgcttggattcaccaata 284
Query: 1048 aaacctgaaaagaaagccaagtttgttgtacatgcagcaggggacgtggggatatcaggt 1107
||| ||| ||||||| ||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 285 aaatctggaaagaaacaaaagtttgttgtacatgcggcaggggatgtggggatatcaggt 344
Query: 1108 gatggataccgatggcgcaagtatggacagaaaatggtgaaggggaatccaaatcccaga 1167
||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 345 gatgggtaccgatggcgcaagtatggacaaaaaatggtgaaggggaaacctcatcccaga 404
Query: 1168 aactactacagatgcacttctgctggatgtcctgtccgaaagcacattgagactgctgta 1227
|||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 405 aactactacagatgcacttctgctggatgtcctgcccggaagcacattgagactgctgtg 464
Query: 1228 gataactcagatgctgtcatcataacatacaagggtgtgcatgaccatgaaatgcctgtg 1287
||| |||| | | ||||||||| ||||||||||| || ||||||||||| |||||||||
Sbjct: 465 gatgactcgaacgatgtcatcatcacatacaagggagtacatgaccatgacatgcctgtg 524
Query: 1288 cccaagaaacgacatgg 1304
|| ||||||||||||||
Sbjct: 525 cctaagaaacgacatgg 541
>gnl|LJGI|TC72364 weakly similar to UniRef100_A7LHI1 Cluster: WRKY44; n=1; Glycine
max|Rep: WRKY44 - Glycine max (Soybean), partial (56%)
Length = 787
Score = 176 bits (89), Expect = 3e-43
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 524 aagtagacaagaaaattccttctggtggtaaaagcttatctgctgtttctgttgcaagga 583
|||||||||| | || |||||| |||||| || || ||| ||||| |||||||||||
Sbjct: 503 aagtagacaaaacaactccttcaagtggtacaactttttcttctgttcctgttgcaaggt 562
Query: 584 catcagcatctgatggatacaactggcggaagtatggtcaaaagcaagtaaagagtccta 643
|||| ||| | |||||||| || ||||||||||||||||| |||||||| || |||||||
Sbjct: 563 catctgcaaccgatggatataattggcggaagtatggtcagaagcaagtgaaaagtccta 622
Query: 644 caggttctcgaagctattacaggtgttctcattcagactgttctgttaaaaagattgaac 703
|||||||||||||||||||||||| ||||||||| |||| || ||| ||| |||||
Sbjct: 623 ttggttctcgaagctattacaggtgtactcattcagcttgttgtgctaagaaggttgaat 682
Query: 704 gctgtgatcattcaggtcatgtgatagaaattgtttataaaagtgaacacagtcacgatc 763
|||||| ||||||||||||||| || ||||| ||||||||| |||||||||| ||||
Sbjct: 683 tctgtgaccattcaggtcatgtgtcggagattgtatataaaagtcaacacagtcatgatc 742
Query: 764 ccccacggaaaactaat 780
| |||| |||||||||
Sbjct: 743 caccacataaaactaat 759
>gnl|LJGI|BP086025 UniRef100_A7PFS4 Cluster: Chromosome chr11 scaffold_14, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_14, whole genome shotgun sequence - Vitis
vinifera (Grape), partial (6%)
Length = 191
Score = 139 bits (70), Expect = 6e-32
Identities = 73/74 (98%)
Strand = Plus / Minus
Query: 1454 ttgggggtgagaaagcaatggagtcagctcgaacgcttctgagcataggctttgaaatta 1513
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ttgggggtgagaaagccatggagtcagctcgaacgcttctgagcataggctttgaaatta 132
Query: 1514 agccttgctgaatt 1527
||||||||||||||
Sbjct: 131 agccttgctgaatt 118
>gnl|LJGI|TC75441 similar to UniRef100_A7PFS4 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 522
Score = 117 bits (59), Expect = 2e-25
Identities = 262/329 (79%), Gaps = 3/329 (0%)
Strand = Plus / Plus
Query: 1198 cctgtccgaaagcacattgagactgctgtagataactcagatgctgtcatcataacatac 1257
|||| ||| |||||||||||||||||||| ||| |||| | | ||||||||| ||||||
Sbjct: 1 cctgcccggaagcacattgagactgctgtggatgactcgaacgatgtcatcatcacatac 60
Query: 1258 aagggtgtgcatgaccatgaaatgcctgtgcccaagaaacgacatggtcccctaagagct 1317
||||| || ||||||||||| ||||||||||| |||||||||||||| | | | |||
Sbjct: 61 aagggagtacatgaccatgacatgcctgtgcctaagaaacgacatggccagccgaatgct 120
Query: 1318 ccttttgtggctgatgctgcacctgccgccatgaataatttgccgtcaaagaatcccgac 1377
|| | ||||||| ||| |||||||| | |||| ||||||| | | ||| | |||
Sbjct: 121 ccactcgtggctgctgcagcacctgcttcaatgagcaatttgcagctcatgaaaactgac 180
Query: 1378 tcgctgcaaaaccagaaagcttctactcaatggtcagtggacacagaaggtgaactaaca 1437
|| | ||||||||||| || ||||||| || | ||| | | || ||| ||||
Sbjct: 181 tcaccaaaaaaccagaaaaatt---ctcaatgttccggggaaattggtggagaattaact 237
Query: 1438 ggggaagccatggaacttgggggtgagaaagcaatggagtcagctcgaacgcttctgagc 1497
||||||||| ||||||||| |||||||||||||| || ||||||||| | |||||||||
Sbjct: 238 ggggaagcctcggaacttggtggtgagaaagcaattgaatcagctcgagctcttctgagc 297
Query: 1498 ataggctttgaaattaagccttgctgaat 1526
||||| ||||||||||| |||||||||||
Sbjct: 298 ataggttttgaaattaaaccttgctgaat 326