Miyakogusa Predicted Gene
- Lj4g3v1983500.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1983500.1 CUFF.50046.1
(354 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP057255 homologue to UniRef100_Q945F4 Cluster: Eukaryo... 252 1e-66
gnl|LJGI|TC60132 homologue to UniRef100_Q71F50 Cluster: Eukaryot... 94 7e-19
gnl|LJGI|AU088753 similar to UniRef100_Q945F4 Cluster: Eukaryoti... 82 3e-15
gnl|LJGI|TC57704 homologue to UniRef100_Q945F4 Cluster: Eukaryot... 82 3e-15
gnl|LJGI|TC67187 homologue to UniRef100_A6YGE9 Cluster: Translat... 78 4e-14
gnl|LJGI|TC60723 homologue to UniRef100_A6YGE9 Cluster: Translat... 78 4e-14
gnl|LJGI|TC67467 homologue to UniRef100_Q945F4 Cluster: Eukaryot... 68 4e-11
>gnl|LJGI|BP057255 homologue to UniRef100_Q945F4 Cluster: Eukaryotic translation
initiation factor 5A-2; n=1; Medicago sativa|Rep:
Eukaryotic translation initiation factor 5A-2 - Medicago
sativa (Alfalfa), partial (80%)
Length = 509
Score = 252 bits (127), Expect = 1e-66
Identities = 127/127 (100%)
Strand = Plus / Plus
Query: 178 acatcacagttgtgggatgaaggaacaatatcttcaagctttctcccattgaaaacatca 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 acatcacagttgtgggatgaaggaacaatatcttcaagctttctcccattgaaaacatca 416
Query: 238 atggcgacaaagtggcactttgcatgtccatgcttgcctgtttttgatgtggaaacttca 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 atggcgacaaagtggcactttgcatgtccatgcttgcctgtttttgatgtggaaacttca 476
Query: 298 acaacct 304
|||||||
Sbjct: 477 acaacct 483
Score = 117 bits (59), Expect = 5e-26
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 36 acaaaaccatcttcagagatatcaatcagctgataatcagtgcgattcacgtgtggaac 94
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 acaaaaccatcttcagagatatcaatcagctgataatcagtgcgattcacgtgtggaac 358
>gnl|LJGI|TC60132 homologue to UniRef100_Q71F50 Cluster: Eukaryotic translation
initiation factor 5A isoform II; n=1; Hevea
brasiliensis|Rep: Eukaryotic translation initiation
factor 5A isoform II - Hevea brasiliensis (Para rubber
tree), complete
Length = 739
Score = 93.7 bits (47), Expect = 7e-19
Identities = 107/127 (84%)
Strand = Plus / Minus
Query: 178 acatcacagttgtgggatgaaggaacaatatcttcaagctttctcccattgaaaacatca 237
|||||||| |||||||| || ||||||||||| ||||||||| | || |||||| ||||
Sbjct: 330 acatcacaattgtgggaagagggaacaatatcctcaagctttttggcagtgaaaatatca 271
Query: 238 atggcgacaaagtggcactttgcatgtccatgcttgcctgtttttgatgtggaaacttca 297
|| || |||||||||||||| ||||| |||||||| || || || || || ||||| |||
Sbjct: 270 attgcaacaaagtggcacttagcatgaccatgcttaccagtcttggaggttgaaacctca 211
Query: 298 acaacct 304
|||||||
Sbjct: 210 acaacct 204
>gnl|LJGI|AU088753 similar to UniRef100_Q945F4 Cluster: Eukaryotic translation
initiation factor 5A-2; n=1; Medicago sativa|Rep:
Eukaryotic translation initiation factor 5A-2 - Medicago
sativa (Alfalfa), complete
Length = 717
Score = 81.8 bits (41), Expect = 3e-15
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 180 atcacagttgtgggatgaaggaacaatatcttcaagctttctcccattgaaaacatcaat 239
||||||||| ||||| || || |||||||| ||||||||| | || |||| | |||||
Sbjct: 268 atcacagttatgggaagatgggacaatatcctcaagctttttgccggtgaagatgtcaat 209
Query: 240 ggcgacaaagtggcactttgcatgtccatgcttgcctgtttttgatgtggaaacttcaac 299
|| |||||||| ||||| ||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 208 agcaacaaagtgacacttcgcatgtccatgcttgccagttttggaagtagaaacctcaac 149
Query: 300 aacct 304
|||||
Sbjct: 148 aacct 144
>gnl|LJGI|TC57704 homologue to UniRef100_Q945F4 Cluster: Eukaryotic translation
initiation factor 5A-2; n=1; Medicago sativa|Rep:
Eukaryotic translation initiation factor 5A-2 - Medicago
sativa (Alfalfa), complete
Length = 827
Score = 81.8 bits (41), Expect = 3e-15
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 180 atcacagttgtgggatgaaggaacaatatcttcaagctttctcccattgaaaacatcaat 239
||||||||| ||||| || || |||||||| ||||||||| | || |||| | |||||
Sbjct: 289 atcacagttatgggaagatgggacaatatcctcaagctttttgccggtgaagatgtcaat 230
Query: 240 ggcgacaaagtggcactttgcatgtccatgcttgcctgtttttgatgtggaaacttcaac 299
|| |||||||| ||||| ||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 229 agcaacaaagtgacacttcgcatgtccatgcttgccagttttggaagtagaaacctcaac 170
Query: 300 aacct 304
|||||
Sbjct: 169 aacct 165
>gnl|LJGI|TC67187 homologue to UniRef100_A6YGE9 Cluster: Translation initiation
factor; n=1; Carica papaya|Rep: Translation initiation
factor - Carica papaya (Papaya), complete
Length = 777
Score = 77.8 bits (39), Expect = 4e-14
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 178 acatcacagttgtgggatgaaggaacaatatcttcaagctttctcccattgaaaacatca 237
|||||||| || || || |||||||||||||| |||||||| | ||| |||| | ||||
Sbjct: 333 acatcacaattatgagaagaaggaacaatatcctcaagcttcttgccagtgaagatatca 274
Query: 238 atggcgacaaagtggcactttgcatgtccatgcttgcctgtttttgatgtggaaacttca 297
|| | |||||||||||||| ||||| || ||||| || || || || ||||||||||||
Sbjct: 273 attccaacaaagtggcacttagcatgaccgtgcttcccagtcttggaagtggaaacttca 214
Query: 298 acaacct 304
|||||||
Sbjct: 213 acaacct 207
>gnl|LJGI|TC60723 homologue to UniRef100_A6YGE9 Cluster: Translation initiation
factor; n=1; Carica papaya|Rep: Translation initiation
factor - Carica papaya (Papaya), complete
Length = 818
Score = 77.8 bits (39), Expect = 4e-14
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 178 acatcacagttgtgggatgaaggaacaatatcttcaagctttctcccattgaaaacatca 237
|||||||| || || || |||||||||||||| |||||||| | ||| |||| | ||||
Sbjct: 337 acatcacaattatgagaagaaggaacaatatcctcaagcttcttgccagtgaagatatca 278
Query: 238 atggcgacaaagtggcactttgcatgtccatgcttgcctgtttttgatgtggaaacttca 297
|| | |||||||||||||| ||||| || ||||| || || || || ||||||||||||
Sbjct: 277 attccaacaaagtggcacttagcatgaccgtgcttcccagtcttggaagtggaaacttca 218
Query: 298 acaacct 304
|||||||
Sbjct: 217 acaacct 211
>gnl|LJGI|TC67467 homologue to UniRef100_Q945F4 Cluster: Eukaryotic translation
initiation factor 5A-2; n=1; Medicago sativa|Rep:
Eukaryotic translation initiation factor 5A-2 - Medicago
sativa (Alfalfa), partial (81%)
Length = 691
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 235 tcaatggcgacaaagtggcactttgcatgtccatgcttgcctgtttttgatgtggaaact 294
||||| || |||||||| ||||| ||||||||||||||||| ||||| || || |||||
Sbjct: 209 tcaatagcaacaaagtgacacttcgcatgtccatgcttgccagttttggaagtagaaacc 150
Query: 295 tcaacaacct 304
||||||||||
Sbjct: 149 tcaacaacct 140