Miyakogusa Predicted Gene

Lj4g3v1983380.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1983380.1 Non Chatacterized Hit- tr|I1JGN9|I1JGN9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,87.07,0,FA_desaturase,Fatty acid desaturase, type 1; seg,NULL;
FATTY ACID DESATURASE 2,NULL,CUFF.50037.1
         (1329 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP042120 homologue to UniRef100_Q0J5E5 Cluster: Os08g04...   202   4e-51
gnl|LJGI|BP028972 homologue to UniRef100_Q0J5E5 Cluster: Os08g04...    84   3e-15

>gnl|LJGI|BP042120 homologue to UniRef100_Q0J5E5 Cluster: Os08g0440900 protein; n=2;
            Oryza sativa Japonica Group|Rep: Os08g0440900 protein -
            Oryza sativa subsp. japonica (Rice), partial (18%)
          Length = 473

 Score =  202 bits (102), Expect = 4e-51
 Identities = 102/102 (100%)
 Strand = Plus / Minus

                                                                        
Query: 949  gtacatcatactgcaccacacataccattcaaagactcagaaaagtggaatgctgctcaa 1008
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473  gtacatcatactgcaccacacataccattcaaagactcagaaaagtggaatgctgctcaa 414

                                                      
Query: 1009 gcacagctaaatggaactgttcattgtgattaccctcaatgg 1050
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413  gcacagctaaatggaactgttcattgtgattaccctcaatgg 372


>gnl|LJGI|BP028972 homologue to UniRef100_Q0J5E5 Cluster: Os08g0440900 protein; n=2;
            Oryza sativa Japonica Group|Rep: Os08g0440900 protein -
            Oryza sativa subsp. japonica (Rice), partial (7%)
          Length = 399

 Score = 83.8 bits (42), Expect = 3e-15
 Identities = 42/42 (100%)
 Strand = Plus / Minus

                                                      
Query: 1288 attaaatttttgaagaatgtcatgcctgattatgcttaagtt 1329
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399  attaaatttttgaagaatgtcatgcctgattatgcttaagtt 358