Miyakogusa Predicted Gene
- Lj4g3v1982180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1982180.1 tr|A9SWN4|A9SWN4_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,73.68,3e-18,Ring finger,Zinc finger, RING-type;
zf-RING_2,Zinc finger, RING-type; RING FINGER PROTEIN
6/12/38,NU,NODE_2550_length_1954_cov_78.188843.path2.1
(1620 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78203 similar to UniRef100_Q9XXV5 Cluster: EDTP; n=1;... 2123 0.0
gnl|LJGI|TC64162 similar to UniRef100_A7QS20 Cluster: Chromosome... 1156 0.0
gnl|LJGI|BP072411 similar to UniRef100_Q4AJQ0 Cluster: Glycosyl ... 133 4e-30
>gnl|LJGI|TC78203 similar to UniRef100_Q9XXV5 Cluster: EDTP; n=1; Sarcophaga
peregrina|Rep: EDTP - Sarcophaga peregrina (Flesh fly)
(Boettcherisca peregrina), partial (4%)
Length = 1258
Score = 2123 bits (1071), Expect = 0.0
Identities = 1074/1075 (99%)
Strand = Plus / Plus
Query: 1 atgggttcttcttctagtcgtctcgggtctcgctcttctcctcctcgggtcaacaacaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 atgggttcttcttctagtcgtctcgggtctcgctcttctcctcctcgggtcaacaacaac 243
Query: 61 cgcttcagactatcctctcttctctgtggatcctccgcttcccgctctacaactcctcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cgcttcagactatcctctcttctctgtggatcctccgcttcccgctctacaactcctcag 303
Query: 121 atggaagaacgtccatctgagcttcaggttggttcggcaagagattttgatgatgaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 atggaagaacgtccatctgagcttcaggttggttcggcaagagattttgatgatgaaatt 363
Query: 181 cagaaagcagcctctgaggaatcgtctttatcatgtacagaagctagaactagctattgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cagaaagcagcctctgaggaatcgtctttatcatgtacagaagctagaactagctattgt 423
Query: 241 ccccgtgctgaaacttcaacctcatctgatatgggagttgagttctgtggtgataaaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ccccgtgctgaaacttcaacctcatctgatatgggagttgagttctgtggtgataaaacc 483
Query: 301 gttgaaggttcttccagaaatgttgcagcaaatagtcagaggaagtgtttgtctgaacgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gttgaaggttcttccagaaatgttgcagcaaatagtcagaggaagtgtttgtctgaacgt 543
Query: 361 caggagctagttcctccttatcaggtaagcgccgataatagtcgtcatgaatcatatagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 caggagctagttcctccttatcaggtaagcgccgataatagtcgtcatgaatcatatagt 603
Query: 421 gatagtagcaacacagctagtacttcatctgttgaacatcagtcttcagatccagtttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 604 gatagtagcaacacagctagtacttcatctgttgaacatcagtcttcagatccagttcct 663
Query: 481 ataagtgtttctgctaacaaggatgcagtcaataatgttgatgatccagtgtttagtggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ataagtgtttctgctaacaaggatgcagtcaataatgttgatgatccagtgtttagtggt 723
Query: 541 atctgtcaaacctctcgtgacacgatgtatccaaggagttcaacccctcaagagcgtgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 atctgtcaaacctctcgtgacacgatgtatccaaggagttcaacccctcaagagcgtgga 783
Query: 601 aataccagttctgatgaaatttctgttgagaatcacactggtgcattcacatctatccag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 aataccagttctgatgaaatttctgttgagaatcacactggtgcattcacatctatccag 843
Query: 661 agtgctccttccaatcctgttgctcaagtttccaatataatggcaatttctcaagtgcca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 agtgctccttccaatcctgttgctcaagtttccaatataatggcaatttctcaagtgcca 903
Query: 721 gaagatgaacctcttcgcgaggcaataccttcaggtttaggttttcttgtgtccaatcgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 gaagatgaacctcttcgcgaggcaataccttcaggtttaggttttcttgtgtccaatcgg 963
Query: 781 gaaacagggcagggagatgatagcgtgattcaagttgacgtggtcacaatatcttccaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 gaaacagggcagggagatgatagcgtgattcaagttgacgtggtcacaatatcttccaac 1023
Query: 841 attttgtcagcaagcaatgcagatgccaatgatcatgattccagaagaaatggtagaaga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 attttgtcagcaagcaatgcagatgccaatgatcatgattccagaagaaatggtagaaga 1083
Query: 901 ttattttgggatgctttttcacgacgtagctctggaaggcttggtgattctccgaccatt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 ttattttgggatgctttttcacgacgtagctctggaaggcttggtgattctccgaccatt 1143
Query: 961 gtcttctccagtggaggtgctgatgatacaggatctcaagatcgatggctcattgatttt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 gtcttctccagtggaggtgctgatgatacaggatctcaagatcgatggctcattgatttt 1203
Query: 1021 agcggtgatttaccaaatgatagggttggggatgatgctggaaatcctggtcgta 1075
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 agcggtgatttaccaaatgatagggttggggatgatgctggaaatcctggtcgta 1258
>gnl|LJGI|TC64162 similar to UniRef100_A7QS20 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(89%)
Length = 804
Score = 1156 bits (583), Expect = 0.0
Identities = 583/583 (100%)
Strand = Plus / Plus
Query: 1038 tgatagggttggggatgatgctggaaatcctggtcgtagaactcatagatcgagtgaacg 1097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgatagggttggggatgatgctggaaatcctggtcgtagaactcatagatcgagtgaacg 60
Query: 1098 aatgcggcacccaagatctgagatttgggaaaggcttcgtggtggccttgatgagattgg 1157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgcggcacccaagatctgagatttgggaaaggcttcgtggtggccttgatgagattgg 120
Query: 1158 tcggttgaattcttcatgtccattaggactccatgctgatggtatgtgctcatgcgagtc 1217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcggttgaattcttcatgtccattaggactccatgctgatggtatgtgctcatgcgagtc 180
Query: 1218 tttcccaatggctgaggaatctagcactcgagcaagcatttcaagaatagtcatgctggc 1277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttcccaatggctgaggaatctagcactcgagcaagcatttcaagaatagtcatgctggc 240
Query: 1278 tgaggctctgtttgaggttttagatgaaatccatcggcaacctggatcactttccctatc 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgaggctctgtttgaggttttagatgaaatccatcggcaacctggatcactttccctatc 300
Query: 1338 catggtctcactccccgcacctgaatcaattgttgactccttccctctgaagtctcacaa 1397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 catggtctcactccccgcacctgaatcaattgttgactccttccctctgaagtctcacaa 360
Query: 1398 aaagggcgatgcagctaatggagacaatgatgctgaacaatgtcacatatgcctggctga 1457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaagggcgatgcagctaatggagacaatgatgctgaacaatgtcacatatgcctggctga 420
Query: 1458 gtatgaagaaggggaccaaatacgagttcttccttgcaaccatgagtaccacaagttgtg 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtatgaagaaggggaccaaatacgagttcttccttgcaaccatgagtaccacaagttgtg 480
Query: 1518 tgttgacaagtggcttaaggaaatacatggtgtgtgccctctttgtcgtggcaatgtttg 1577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgttgacaagtggcttaaggaaatacatggtgtgtgccctctttgtcgtggcaatgtttg 540
Query: 1578 tggagagttgtctgctacctactcagtagtgcagtctcaatga 1620
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tggagagttgtctgctacctactcagtagtgcagtctcaatga 583
>gnl|LJGI|BP072411 similar to UniRef100_Q4AJQ0 Cluster: Glycosyl transferase, family 2;
n=1; Chlorobium phaeobacteroides BS1|Rep: Glycosyl
transferase, family 2 - Chlorobium phaeobacteroides BS1,
partial (6%)
Length = 362
Score = 133 bits (67), Expect = 4e-30
Identities = 74/75 (98%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 1547 gtgtgtgccctctttgtcgtggcaatgtttgtggagagttgtctgctacct-actcagta 1605
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 165 gtgtgtgccctctttgtcgtggcaatgtttgtggagagttgtctgctacctaactcagta 106
Query: 1606 gtgcagtctcaatga 1620
|||||||||||||||
Sbjct: 105 gtgcagtctcaatga 91
Score = 65.9 bits (33), Expect = 7e-10
Identities = 90/101 (89%), Gaps = 6/101 (5%)
Strand = Plus / Minus
Query: 1453 gctgagtatgaagaa-ggggaccaaatac-gagttctt-ccttgcaa-ccatgagta-cc 1507
||||||||||||||| ||||||| ||||| |||||||| |||||| | ||||||||| ||
Sbjct: 362 gctgagtatgaagaaaggggaccgaataccgagttcttaccttgccatccatgagtatcc 303
Query: 1508 acaagttgtgtgttgacaagtgg-cttaaggaaatacatgg 1547
||| ||||||||||||||||| |||||||||||||||||
Sbjct: 302 acagtctgtgtgttgacaagtggccttaaggaaatacatgg 262