Miyakogusa Predicted Gene
- Lj4g3v1971930.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1971930.1 tr|G7JHS5|G7JHS5_MEDTR 116 kDa U5 small nuclear
ribonucleoprotein component OS=Medicago truncatula G,92.53,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; Ribosomal protein
S5 domain 2-like,Riboso,CUFF.50001.1
(2886 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC600076 1108 0.0
gnl|LJGI|BP069475 807 0.0
gnl|LJGI|TC66066 579 e-164
>gnl|LJGI|DC600076
Length = 577
Score = 1108 bits (559), Expect = 0.0
Identities = 559/559 (100%)
Strand = Plus / Plus
Query: 1 atggacgatagcttgtacgacgagttcggcaactacatcggacccgaaatcgagtccgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 atggacgatagcttgtacgacgagttcggcaactacatcggacccgaaatcgagtccgac 78
Query: 61 caagactccgacagagaaccttccgacgacgaacagccttccgacgccgacaccgcccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 caagactccgacagagaaccttccgacgacgaacagccttccgacgccgacaccgcccaa 138
Query: 121 ccttccgacggcgaggctcccgccaccaatggctggatcaccgcatccggcgaccccaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 ccttccgacggcgaggctcccgccaccaatggctggatcaccgcatccggcgaccccaac 198
Query: 181 gacgtcgacatggtcgacaaccaggtggtcctggcggaggacaagaagtactaccccacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gacgtcgacatggtcgacaaccaggtggtcctggcggaggacaagaagtactaccccacc 258
Query: 241 gccgaagaagtcttcggcgaagatgtggaaaccctagtcatggatgaagatgaacagcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gccgaagaagtcttcggcgaagatgtggaaaccctagtcatggatgaagatgaacagcca 318
Query: 301 ctggagcaacccattatcaagcctgtgaggaagatgaagttcgaggttggcgtgaaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctggagcaacccattatcaagcctgtgaggaagatgaagttcgaggttggcgtgaaggat 378
Query: 361 tcgtcaacctacgtttcgtcacaatttcttctgggtctcatgtcgaacccttcgttggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tcgtcaacctacgtttcgtcacaatttcttctgggtctcatgtcgaacccttcgttggct 438
Query: 421 aggaatgtggctcttgtggggcacttgcagcatgggaagacggtgttcatggatatgctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aggaatgtggctcttgtggggcacttgcagcatgggaagacggtgttcatggatatgctg 498
Query: 481 gtggagcagactcaccatatgtccacgtttgattcacagagtgagaagcatttgcggtat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gtggagcagactcaccatatgtccacgtttgattcacagagtgagaagcatttgcggtat 558
Query: 541 actgatacgaggattgatg 559
|||||||||||||||||||
Sbjct: 559 actgatacgaggattgatg 577
>gnl|LJGI|BP069475
Length = 442
Score = 807 bits (407), Expect = 0.0
Identities = 419/422 (99%), Gaps = 2/422 (0%)
Strand = Plus / Plus
Query: 1055 ctaataaatttgcttctcgcctttggggagactactattttcatcctgataccagaacct 1114
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 23 ctaataaatttgcttctcgcct--ggggagactactattttcatcctgataccagaacct 80
Query: 1115 tcaaaaagaaaccccctgtcagtggaggagaacgatcttttgttgagtttgtactggagc 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 tcaaaaagaaaccccctgtcagtggaggagaacgatcttttgttgagtttgtactggagc 140
Query: 1175 cgctttacaagatatatagccaagtaattggggagcataagaaaagtgtggagacaactc 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cgctttacaagatatatagccaagtaattggggagcataagaaaagtgtggagacaactc 200
Query: 1235 tagcagaacttggagttactctaagtaatgcagcttatagattaaatgttagaccattgc 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagcagaacttggagttactctaagtaatgcagcttatagattaaatgttagaccattgc 260
Query: 1295 taaggctggcttgtagctctgtttttggtcaagcttcaggtttcactgatatgcttgttc 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaggctggcttgtagctctgtttttggtcaagcttcaggtttcactgatatgcttgttc 320
Query: 1355 agcatataccttccccgagagatgccgcagtaaagaaagttgatcatatatataccggac 1414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcatataccttccccgagagatgccgcagtaaagaaagttgatcatatatataccggac 380
Query: 1415 cgaaagactcatccatctacaaagccatgacacagtgtgattcttcagggcccctaatgg 1474
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaaagactcatccatctacaaagccatgacacagtgtgattcttcagggcccctaatgg 440
Query: 1475 tt 1476
||
Sbjct: 441 tt 442
>gnl|LJGI|TC66066
Length = 890
Score = 579 bits (292), Expect = e-164
Identities = 292/292 (100%)
Strand = Plus / Plus
Query: 2595 attgtctcgtaggcgtggacatgttactgctgatgttcctcaaccaggcacccctgctta 2654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 attgtctcgtaggcgtggacatgttactgctgatgttcctcaaccaggcacccctgctta 61
Query: 2655 tttagttaaggcatttttacccgtgatagaatcttttggttttgagactgacttgagata 2714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tttagttaaggcatttttacccgtgatagaatcttttggttttgagactgacttgagata 121
Query: 2715 ccatacacaaggtcaagcattttgcgtctcagtttttgatcattgggctattgttcctgg 2774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ccatacacaaggtcaagcattttgcgtctcagtttttgatcattgggctattgttcctgg 181
Query: 2775 tgatcctttggacaaaggcattgttttgcgtccccttgaaccggcaccaatccagcatct 2834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgatcctttggacaaaggcattgttttgcgtccccttgaaccggcaccaatccagcatct 241
Query: 2835 tgcccgtgagtttatggtaaagacaaggcgtagaaagggaatgagtgaggat 2886
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgcccgtgagtttatggtaaagacaaggcgtagaaagggaatgagtgaggat 293