Miyakogusa Predicted Gene
- Lj4g3v1970880.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1970880.3 Non Chatacterized Hit- tr|C8TFD4|C8TFD4_ORYSI
Putative uncharacterized protein K0122H06.6 OS=Oryza
s,65.15,3e-18,seg,NULL; Ubiquitin homologues,Ubiquitin;
UBIQUITIN,Ubiquitin subgroup; SUBFAMILY NOT NAMED,NULL;
SC,CUFF.50043.3
(1422 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS326583 similar to UniRef100_A7QS28 Cluster: Chromosom... 1199 0.0
gnl|LJGI|TC60873 similar to UniRef100_A7QS28 Cluster: Chromosome... 1176 0.0
gnl|LJGI|TC78949 similar to UniRef100_A7QS28 Cluster: Chromosome... 1098 0.0
gnl|LJGI|TC65568 similar to UniRef100_A7QS28 Cluster: Chromosome... 547 e-155
>gnl|LJGI|FS326583 similar to UniRef100_A7QS28 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (15%)
Length = 737
Score = 1199 bits (605), Expect = 0.0
Identities = 605/605 (100%)
Strand = Plus / Plus
Query: 1 atgggaagtaatggcaccgaagagatcactagcgatatcagcactggaaatgcagacacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atgggaagtaatggcaccgaagagatcactagcgatatcagcactggaaatgcagacacc 192
Query: 61 actattgagataaagatcaaaatgttggattcccaaacttttaccctcagagtggataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 actattgagataaagatcaaaatgttggattcccaaacttttaccctcagagtggataaa 252
Query: 121 cagatgccggtccctgctctgaaagcacagattgaatctttaactggagtgatgtcagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cagatgccggtccctgctctgaaagcacagattgaatctttaactggagtgatgtcagaa 312
Query: 181 aggcagcgcttaatttgccaagggaaagttctaaaggatgatcaactcctgtctgcctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aggcagcgcttaatttgccaagggaaagttctaaaggatgatcaactcctgtctgcctat 372
Query: 241 catgttgaagatggtcataccttgcatctggttgcaaggcatcctgatctaacaccacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 catgttgaagatggtcataccttgcatctggttgcaaggcatcctgatctaacaccacca 432
Query: 301 ggaagtttgcccaatcattcagcgactgaaccaaattcaagcacaggccatggttatagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ggaagtttgcccaatcattcagcgactgaaccaaattcaagcacaggccatggttatagt 492
Query: 361 aatcaagtagccccgggggtatttattgaaactttcaatgtgcctgttcagggcgatgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aatcaagtagccccgggggtatttattgaaactttcaatgtgcctgttcagggcgatgga 552
Query: 421 gttccttctgaaatcaataggattgtttctgctgtccttggctctatggggcttccaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gttccttctgaaatcaataggattgtttctgctgtccttggctctatggggcttccaaat 612
Query: 481 ttcgcaagtggtggtgaagggatttttgtcagggagcatgattcaacaggcttaggaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ttcgcaagtggtggtgaagggatttttgtcagggagcatgattcaacaggcttaggaaga 672
Query: 541 acttcggattttactggaaatccatctcgtccacaacctgaacaagcaggtttccggatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 acttcggattttactggaaatccatctcgtccacaacctgaacaagcaggtttccggatt 732
Query: 601 tcgtc 605
|||||
Sbjct: 733 tcgtc 737
>gnl|LJGI|TC60873 similar to UniRef100_A7QS28 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (15%)
Length = 755
Score = 1176 bits (593), Expect = 0.0
Identities = 593/593 (100%)
Strand = Plus / Plus
Query: 1 atgggaagtaatggcaccgaagagatcactagcgatatcagcactggaaatgcagacacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 atgggaagtaatggcaccgaagagatcactagcgatatcagcactggaaatgcagacacc 222
Query: 61 actattgagataaagatcaaaatgttggattcccaaacttttaccctcagagtggataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 actattgagataaagatcaaaatgttggattcccaaacttttaccctcagagtggataaa 282
Query: 121 cagatgccggtccctgctctgaaagcacagattgaatctttaactggagtgatgtcagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cagatgccggtccctgctctgaaagcacagattgaatctttaactggagtgatgtcagaa 342
Query: 181 aggcagcgcttaatttgccaagggaaagttctaaaggatgatcaactcctgtctgcctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 aggcagcgcttaatttgccaagggaaagttctaaaggatgatcaactcctgtctgcctat 402
Query: 241 catgttgaagatggtcataccttgcatctggttgcaaggcatcctgatctaacaccacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 catgttgaagatggtcataccttgcatctggttgcaaggcatcctgatctaacaccacca 462
Query: 301 ggaagtttgcccaatcattcagcgactgaaccaaattcaagcacaggccatggttatagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ggaagtttgcccaatcattcagcgactgaaccaaattcaagcacaggccatggttatagt 522
Query: 361 aatcaagtagccccgggggtatttattgaaactttcaatgtgcctgttcagggcgatgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 aatcaagtagccccgggggtatttattgaaactttcaatgtgcctgttcagggcgatgga 582
Query: 421 gttccttctgaaatcaataggattgtttctgctgtccttggctctatggggcttccaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gttccttctgaaatcaataggattgtttctgctgtccttggctctatggggcttccaaat 642
Query: 481 ttcgcaagtggtggtgaagggatttttgtcagggagcatgattcaacaggcttaggaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ttcgcaagtggtggtgaagggatttttgtcagggagcatgattcaacaggcttaggaaga 702
Query: 541 acttcggattttactggaaatccatctcgtccacaacctgaacaagcaggttt 593
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 acttcggattttactggaaatccatctcgtccacaacctgaacaagcaggttt 755
>gnl|LJGI|TC78949 similar to UniRef100_A7QS28 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (15%)
Length = 801
Score = 1098 bits (554), Expect = 0.0
Identities = 577/586 (98%), Gaps = 9/586 (1%)
Strand = Plus / Plus
Query: 1 atgggaagtaatggcaccgaagagatcactagcgatatcagcactggaaatgcagacacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 atgggaagtaatggcaccgaagagatcactagcgatatcagcactggaaatgcagacacc 284
Query: 61 actattgagataaagatcaaaatgttggattcccaaacttttaccctcagagtggataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 actattgagataaagatcaaaatgttggattcccaaacttttaccctcagagtggataaa 344
Query: 121 cagatgccggtccctgctctgaaagcacagattgaatctttaactggagtgatgtcagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cagatgccggtccctgctctgaaagcacagattgaatctttaactggagtgatgtcagaa 404
Query: 181 aggcagcgcttaatttgccaagggaaagttctaaaggatgatcaactcctgtctgcctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aggcagcgcttaatttgccaagggaaagttctaaaggatgatcaactcctgtctgcctat 464
Query: 241 catgttgaagatggtcataccttgcatctggttgcaaggcatcctgatctaacaccacca 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 catg---------gtcataccttgcatctggttgcaaggcatcctgatctaacaccacca 515
Query: 301 ggaagtttgcccaatcattcagcgactgaaccaaattcaagcacaggccatggttatagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ggaagtttgcccaatcattcagcgactgaaccaaattcaagcacaggccatggttatagt 575
Query: 361 aatcaagtagccccgggggtatttattgaaactttcaatgtgcctgttcagggcgatgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 aatcaagtagccccgggggtatttattgaaactttcaatgtgcctgttcagggcgatgga 635
Query: 421 gttccttctgaaatcaataggattgtttctgctgtccttggctctatggggcttccaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gttccttctgaaatcaataggattgtttctgctgtccttggctctatggggcttccaaat 695
Query: 481 ttcgcaagtggtggtgaagggatttttgtcagggagcatgattcaacaggcttaggaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 ttcgcaagtggtggtgaagggatttttgtcagggagcatgattcaacaggcttaggaaga 755
Query: 541 acttcggattttactggaaatccatctcgtccacaacctgaacaag 586
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 acttcggattttactggaaatccatctcgtccacaacctgaacaag 801
>gnl|LJGI|TC65568 similar to UniRef100_A7QS28 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(12%)
Length = 1306
Score = 547 bits (276), Expect = e-155
Identities = 286/288 (99%), Gaps = 1/288 (0%)
Strand = Plus / Plus
Query: 1136 ctggtcctaaccatatcatggttcagcctcttccttttcaacctggagcaagctttggtg 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ctggtcctaaccatatcatggttcagcctcttccttttcaacctggagcaagctttggtg 61
Query: 1196 ctatccctgtgggagctgcacagtctaactcaagtttaggcggtggacttggctcaagtt 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctatccctgtgggagctgcacagtctaactcaagtttaggcggtggacttggctcaagtt 121
Query: 1256 tt-ttcccaaggcgtattgatatacagataagacgaggagcatcaaccacacctggtacc 1314
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tttttcccaaggcgtattgatatacagataagacgaggagcatcaaccacacctggtacc 181
Query: 1315 aatcaggaagagcatggtgatacacaatctgcttcagtccaaagaaatacaggtgaaagt 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aatcaggaagagcatggtgatacacaatctgcttcagtccaaagaaatacaggtgaaagt 241
Query: 1375 tctgttaatcaaacaacctctaggcgtccggatgcatatattgcgggg 1422
||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 242 tctgttaatcaaacaacctctaggcgtccggatgcatctattgcgggg 289