Miyakogusa Predicted Gene

Lj4g3v1957770.1
Show Alignment: 
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1957770.1 tr|G7JGM0|G7JGM0_MEDTR Calcium binding
atopy-related autoantigen OS=Medicago truncatula
GN=MTR_4g116,78.66,0,EF-hand,NULL; EF_HAND_2,EF-HAND 2;
EF_hand_6,NULL; EF_hand_5,NULL; EF_hand_3,EF-hand-like domain;
CA,CUFF.49981.1
         (1395 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AU089291 similar to UniRef100_A7QS40 Cluster: Chromosom...   989   0.0  
gnl|LJGI|TC64197 similar to UniRef100_A8MRL1 Cluster: Uncharacte...   131   1e-29

>gnl|LJGI|AU089291 similar to UniRef100_A7QS40 Cluster: Chromosome undetermined
            scaffold_155, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_155, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (39%)
          Length = 633

 Score =  989 bits (499), Expect = 0.0
 Identities = 503/505 (99%)
 Strand = Plus / Plus

                                                                        
Query: 891  gatcttgagattagagttttcccattatgattacaataaaaaagggaccatttcagccaa 950
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4    gatcttgagattagagttttcccattatgattacaataaaaaagggaccatttcagccaa 63

                                                                        
Query: 951  agattttgccctgtccctggttgcatctgcagacatcaatcacataaacaaactgttaga 1010
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64   agattttgccctgtccctggttgcatctgcagacatcaatcacataaacaaactgttaga 123

                                                                        
Query: 1011 tagagttgaagaattaagcagtgaccagcacctaagagatataagaattacatatgagga 1070
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124  tagagttgaagaattaagcagtgaccagcacctaagagatataagaattacatatgagga 183

                                                                        
Query: 1071 atttcaagcctttgcagaactgcggaagaagttgcaatccttctctctggccttattcag 1130
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184  atttcaagcctttgcagaactgcggaagaagttgcaatccttctctctggccttattcag 243

                                                                        
Query: 1131 ttatggaaaaattaatggggtgttgacaaagaatgattttcagagagcagcatctcaggt 1190
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244  ttatggaaaaattaatggggtgttgacaaagaatgattttcagagagcagcatctcaggt 303

                                                                        
Query: 1191 atgtggcatctgtgttacagataaagtggttgacataatatttcatgtgtttgatgctaa 1250
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304  atgtggcatctgtgttacagataaagtggttgacataatatttcatgtgtttgatgctaa 363

                                                                        
Query: 1251 ccgtgatggaaacttaagtgcaagcgagtttgtgagagtgatacagagaagagaaaataa 1310
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 364  ccgtgatggaaacttaagtgcaagcgagtttgtgagagtgatacaganaagagaaaataa 423

                                                                        
Query: 1311 gtcatcaggtgttggctttggaagtttgatatcttgctgtatgaattgtgtcagtaattt 1370
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424  gtcatcangtgttggctttggaagtttgatatcttgctgtatgaattgtgtcagtaattt 483

                                     
Query: 1371 gtcatcatctaaacttcaattatga 1395
            |||||||||||||||||||||||||
Sbjct: 484  gtcatcatctaaacttcaattatga 508


>gnl|LJGI|TC64197 similar to UniRef100_A8MRL1 Cluster: Uncharacterized protein
           At4g32060.2; n=1; Arabidopsis thaliana|Rep:
           Uncharacterized protein At4g32060.2 - Arabidopsis
           thaliana (Mouse-ear cress), partial (33%)
          Length = 905

 Score =  131 bits (66), Expect = 1e-29
 Identities = 120/138 (86%)
 Strand = Plus / Plus

                                                                       
Query: 597 agagtacatcttttttgtaacactcctcagcatcccagagtcaagcttttcagtggcttt 656
           |||||| ||||||||||| ||| | ||||| ||||| || ||||||||||| ||||| ||
Sbjct: 747 agagtatatcttttttgtgacattactcagtatccctgaatcaagcttttctgtggcatt 806

                                                                       
Query: 657 taaaatgtttgatatcgacaataacggggaaatagacaagcaagaattcaagaaagtgat 716
           ||||||||||||| | |||||||| ||||| |||   ||| |||||||||||||||||||
Sbjct: 807 taaaatgtttgatgtggacaataatggggagataagtaaggaagaattcaagaaagtgat 866

                             
Query: 717 ggcgttgatgcgatctca 734
           ||| ||||||||||||||
Sbjct: 867 ggcattgatgcgatctca 884