Miyakogusa Predicted Gene

Lj4g3v1947720.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1947720.1 Non Chatacterized Hit- tr|C5XWX7|C5XWX7_SORBI
Putative uncharacterized protein Sb04g005696 (Fragment,51.52,4e-18,
,CUFF.50049.1
         (436 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71142 similar to UniRef100_A7QTL0 Cluster: Chromosome...   864   0.0  

>gnl|LJGI|TC71142 similar to UniRef100_A7QTL0 Cluster: Chromosome chr11 scaffold_170,
           whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_170, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (63%)
          Length = 875

 Score =  864 bits (436), Expect = 0.0
 Identities = 436/436 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgaatgtgatgcggtatagctacctcagaggtccaggtggtagattcagaaatcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 atggcgaatgtgatgcggtatagctacctcagaggtccaggtggtagattcagaaatcca 277

                                                                       
Query: 61  tacgatcatggtatcaagaaaaactgttctgatttcttgatcaatggatacaatgaagac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tacgatcatggtatcaagaaaaactgttctgatttcttgatcaatggatacaatgaagac 337

                                                                       
Query: 121 gtggaggtggttgaagaattaggtcagtcggaggagggtgttggaatgatgcacatgaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gtggaggtggttgaagaattaggtcagtcggaggagggtgttggaatgatgcacatgaca 397

                                                                       
Query: 181 aggaactcaaacttagcaaatggagactcacattcgcattctgaacatgcaacgggcact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aggaactcaaacttagcaaatggagactcacattcgcattctgaacatgcaacgggcact 457

                                                                       
Query: 241 gggaatggtcatcatattattaatgtgaattccaataatagcaactccaaaacacatcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gggaatggtcatcatattattaatgtgaattccaataatagcaactccaaaacacatcat 517

                                                                       
Query: 301 ggtcatgttaatggtcatgttcattcttcaaattgtagtcatgctaaccaaggcaaaacc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ggtcatgttaatggtcatgttcattcttcaaattgtagtcatgctaaccaaggcaaaacc 577

                                                                       
Query: 361 agaaatgacagcactcctgtgggcttaggtcttggccttggacggaactctagatctgtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 agaaatgacagcactcctgtgggcttaggtcttggccttggacggaactctagatctgtt 637

                           
Query: 421 gcaccctcatcatgat 436
           ||||||||||||||||
Sbjct: 638 gcaccctcatcatgat 653