Miyakogusa Predicted Gene
- Lj4g3v1934510.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1934510.1 Non Chatacterized Hit- tr|I1MU29|I1MU29_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,95.98,0,SUBFAMILY NOT
NAMED,NULL; ARP2/3 COMPLEX 21 KD SUBUNIT,ARP2/3 complex, p21-Arc
subunit; Arp2/3 compl,CUFF.49975.1
(525 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65324 homologue to UniRef100_A7QTM3 Cluster: Chromoso... 1033 0.0
gnl|LJGI|FS360600 homologue to UniRef100_A7QTM3 Cluster: Chromos... 291 2e-78
>gnl|LJGI|TC65324 homologue to UniRef100_A7QTM3 Cluster: Chromosome chr11
scaffold_170, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_170, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (98%)
Length = 1076
Score = 1033 bits (521), Expect = 0.0
Identities = 524/525 (99%)
Strand = Plus / Plus
Query: 1 atggtttatcactctagctttgtggatgaagatggagtgaacaaagcttgtgggtgccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atggtttatcactctagctttgtggatgaagatggagtgaacaaagcttgtgggtgccct 322
Query: 61 cttcttcctctcaagagccatatcaagggtcctgctccagtttcagatcaagatagaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cttcttcctctcaagagccatatcaagggtcctgctccagtttcagatcaagatagaact 382
Query: 121 gatattgtggatgaagctatcacattcttcagagccaatgtgttcttcagaaactttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gatattgtggatgaagctatcacattcttcagagccaatgtgttcttcagaaactttgat 442
Query: 181 atcaagagccctgctgataagcttctcatatacttgactttttacatcaatgttgctctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atcaagagccctgctgataagcttctcatatacttgactttttacatcaatgttgctctc 502
Query: 241 aagaggcttgaaggtcgcagaactttggctgaaggaaccaaggcaatcatcaacttgggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aagaggcttgaaggtcgcagaactttggctgaaggaaccaaggcaatcatcaacttgggt 562
Query: 301 cttgaaaaagttcctgttcctggagaatctggttttccttttccggggcttttcccactt 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 563 cttgaaaaagttcctgttcctggagaatctggttttccttttccgaggcttttcccactt 622
Query: 361 cctcaatctcataaggaagcagaattgttcagaaattatttgaagcagataagggaagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 cctcaatctcataaggaagcagaattgttcagaaattatttgaagcagataagggaagaa 682
Query: 421 acaagtgggaggttactgaacgttgcatacagacctaatggcactccaaataaatggtgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 acaagtgggaggttactgaacgttgcatacagacctaatggcactccaaataaatggtgg 742
Query: 481 ctggcatttgcaaagaggaaatttatgaacataattatcccttga 525
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ctggcatttgcaaagaggaaatttatgaacataattatcccttga 787
>gnl|LJGI|FS360600 homologue to UniRef100_A7QTM3 Cluster: Chromosome chr11
scaffold_170, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_170, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (26%)
Length = 647
Score = 291 bits (147), Expect = 2e-78
Identities = 147/147 (100%)
Strand = Plus / Minus
Query: 379 gcagaattgttcagaaattatttgaagcagataagggaagaaacaagtgggaggttactg 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gcagaattgttcagaaattatttgaagcagataagggaagaaacaagtgggaggttactg 402
Query: 439 aacgttgcatacagacctaatggcactccaaataaatggtggctggcatttgcaaagagg 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aacgttgcatacagacctaatggcactccaaataaatggtggctggcatttgcaaagagg 342
Query: 499 aaatttatgaacataattatcccttga 525
|||||||||||||||||||||||||||
Sbjct: 341 aaatttatgaacataattatcccttga 315