Miyakogusa Predicted Gene
- Lj4g3v1909910.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1909910.1 Non Chatacterized Hit- tr|I1LNN5|I1LNN5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37392
PE,66.15,0,ZF_PHD_1,Zinc finger, PHD-type, conserved site; no
description,Zinc finger, RING/FYVE/PHD-type; no d,CUFF.49955.1
(1218 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59353 similar to UniRef100_A7QT83 Cluster: Chromosome... 652 0.0
gnl|LJGI|BP036228 similar to UniRef100_A9S470 Cluster: Predicted... 72 9e-12
gnl|LJGI|FS333782 similar to UniRef100_A7QT83 Cluster: Chromosom... 72 9e-12
>gnl|LJGI|TC59353 similar to UniRef100_A7QT83 Cluster: Chromosome chr1 scaffold_166,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_166, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 776
Score = 652 bits (329), Expect = 0.0
Identities = 332/333 (99%)
Strand = Plus / Plus
Query: 1 atggctgctcaatttccatgtgacccccaaggcgtgtgcatggtctgcaaggttgttccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atggctgctcaatttccatgtgacccccaaggcgtgtgcatggtctgcaaggttgttccc 132
Query: 61 cctgacgaggagaatctcacctgcaacacctgcgccacgccatggcatgcgccttgcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 cctgacgaggagaatctcacctgcaacacctgcgccacgccatggcatgcgccttgcctc 192
Query: 121 tcctcctcgcttccggccaccgtcgccgccaccaatgactggcaatgtcccgattgcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tcctcctcgcttccggccaccgtcgccgccaccaatgactggcaatgtcccgattgcact 252
Query: 181 aatctcttctcggctccggtcaaatcgtgccgggacggcccagacggggagctggtttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aatctcttctcggctccggtcaaatcgtgccgggacggcccagacggggagctggtttct 312
Query: 241 gctatcttatcggtgaaggctgatgagtctctcacggcgagtcagaaggctaggaaatgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gctatcttatcggtgaaggctgatgagtctctcacggcgagtcagaaggctaggaaatgc 372
Query: 301 caacagctcctcgccggaaagtccgccgcggtc 333
|||||||||||||||||||||||||| ||||||
Sbjct: 373 caacagctcctcgccggaaagtccgctgcggtc 405
Score = 537 bits (271), Expect = e-152
Identities = 274/275 (99%)
Strand = Plus / Plus
Query: 417 aatgtctgtttctgatattctcacccgcactctcaactgctccatctgcattcagcttcc 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aatgtctgtttctgatattctcacccgcactctcaactgctccatctgcattcagcttcc 539
Query: 477 tgagaggcctgtcacgactccttgtggacacagtttctgtctgaagtgctttgagaaatg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tgagaggcctgtcacgactccttgtggacacagtttctgtctgaagtgctttgagaaatg 599
Query: 537 gattcggcaagggaaaagaacttgtgccaagtgcaggcagaatatccctgcgagcatggc 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gattcggcaagggaaaagaacttgtgccaagtgcaggcagaatatccctgcgagcatggc 659
Query: 597 gagccagcctcgcatcaattctgcgctagtgtttgccattcgtatggcgagggcgtcaaa 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gagccagcctcgcatcaattctgcgctagtgtttgccattcgtatggcgagggcgtcaaa 719
Query: 657 agcgaatggtggtgctggtgcagggccttccggtg 691
|||||||||||||||||||||| ||||||||||||
Sbjct: 720 agcgaatggtggtgctggtgcaaggccttccggtg 754
>gnl|LJGI|BP036228 similar to UniRef100_A9S470 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(15%)
Length = 626
Score = 71.9 bits (36), Expect = 9e-12
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 449 tcaactgctccatctgcattcagcttcctgagaggcctgtcacgactccttgtggacaca 508
|||| |||||| ||||||| ||| | || || || || |||||||||||||| || ||||
Sbjct: 417 tcaattgctccttctgcatgcagttaccagatagacccgtcacgactccttgcggccaca 476
Query: 509 gtttctgtctgaagtgctttgagaaatggattcggcaagggaaa 552
|||||| |||| |||||||||||||||||| | |||||||||
Sbjct: 477 atttctgcttgaaatgctttgagaaatggattggtcaagggaaa 520
>gnl|LJGI|FS333782 similar to UniRef100_A7QT83 Cluster: Chromosome chr1 scaffold_166,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_166, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 657
Score = 71.9 bits (36), Expect = 9e-12
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 449 tcaactgctccatctgcattcagcttcctgagaggcctgtcacgactccttgtggacaca 508
|||| |||||| ||||||| ||| | || || || || |||||||||||||| || ||||
Sbjct: 398 tcaattgctccttctgcatgcagttaccagatagacccgtcacgactccttgcggccaca 457
Query: 509 gtttctgtctgaagtgctttgagaaatggattcggcaagggaaa 552
|||||| |||| |||||||||||||||||| | |||||||||
Sbjct: 458 atttctgcttgaaatgctttgagaaatggattggtcaagggaaa 501