Miyakogusa Predicted Gene
- Lj4g3v1893260.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1893260.1 CUFF.50055.1
(858 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75043 similar to UniRef100_A7QTN2 Cluster: Chromosome... 1697 0.0
gnl|LJGI|TC81337 similar to UniRef100_A7P5W5 Cluster: Chromosome... 174 6e-43
gnl|LJGI|AV768158 similar to UniRef100_A0JJX5 Cluster: NTMC2Type... 90 3e-17
gnl|LJGI|TC64815 similar to UniRef100_A7PD87 Cluster: Chromosome... 90 3e-17
gnl|LJGI|TC61568 similar to UniRef100_A7QTN2 Cluster: Chromosome... 80 3e-14
gnl|LJGI|FS337884 similar to UniRef100_A7QTN2 Cluster: Chromosom... 70 2e-11
gnl|LJGI|TC58508 weakly similar to UniRef100_A2DLT2 Cluster: C2 ... 70 2e-11
>gnl|LJGI|TC75043 similar to UniRef100_A7QTN2 Cluster: Chromosome chr11 scaffold_170,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_170, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (95%)
Length = 2668
Score = 1697 bits (856), Expect = 0.0
Identities = 856/856 (100%)
Strand = Plus / Plus
Query: 1 atgggtttcgtgttcggcgtggtggccggaataatagtcggcctcgccatcatcgtcgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 atgggtttcgtgttcggcgtggtggccggaataatagtcggcctcgccatcatcgtcgcc 711
Query: 61 ttcgtccgctccgagaatgcgcgctccgcccagcgatcccaactcgccgccaccgtcgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ttcgtccgctccgagaatgcgcgctccgcccagcgatcccaactcgccgccaccgtcgcc 771
Query: 121 gctttcgccagaatgacggtggaagattccagaaaacttctcccttctcagtactaccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 gctttcgccagaatgacggtggaagattccagaaaacttctcccttctcagtactaccct 831
Query: 181 tcctgggtcgtcttctccaatcgccagaagctaacttggctcaactcgcatctcaccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 tcctgggtcgtcttctccaatcgccagaagctaacttggctcaactcgcatctcaccaag 891
Query: 241 atctggccctatgtcaatgaagctgcttctgagctcatcaaaacctccgtcgaaccgatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 atctggccctatgtcaatgaagctgcttctgagctcatcaaaacctccgtcgaaccgatt 951
Query: 301 ctggagcagtatagacccatgattttggcttctctgaagttttccaagttcactcttggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 ctggagcagtatagacccatgattttggcttctctgaagttttccaagttcactcttggc 1011
Query: 361 actgtagcgccgcagtttacaggggtgtctataattgaagatggtggagtggatggtgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 actgtagcgccgcagtttacaggggtgtctataattgaagatggtggagtggatggtgtt 1071
Query: 421 acaatggagttagaaatgcagtgggatgggaatcctaatattatacttgatattaaaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 acaatggagttagaaatgcagtgggatgggaatcctaatattatacttgatattaaaact 1131
Query: 481 ctgcttggtgttgcactaccagtgcaggtaaaaaatataggatttactggcgttttcagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 ctgcttggtgttgcactaccagtgcaggtaaaaaatataggatttactggcgttttcagg 1191
Query: 541 ttgatttttaagccgctagttaatgaatttcctggctttggagcagtttgctattcatta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1192 ttgatttttaagccgctagttaatgaatttcctggctttggagcagtttgctattcatta 1251
Query: 601 aggcagaagaaaaagttggattttaccctaaaagtcattggtggcgacatatcaacaatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1252 aggcagaagaaaaagttggattttaccctaaaagtcattggtggcgacatatcaacaatc 1311
Query: 661 cctggattatatgatgccattgaggggacaatccgagacgctgttgaagattctataaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1312 cctggattatatgatgccattgaggggacaatccgagacgctgttgaagattctataaca 1371
Query: 721 tggccagtgagaaaaattgtacccatcttgcccggagactatagtgatctggagttgaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1372 tggccagtgagaaaaattgtacccatcttgcccggagactatagtgatctggagttgaag 1431
Query: 781 cctgtggggatattagaagtaaaacttgtgcaagcaaaggagttaacaaacaaggatatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1432 cctgtggggatattagaagtaaaacttgtgcaagcaaaggagttaacaaacaaggatatt 1491
Query: 841 attggaaaatcggatc 856
||||||||||||||||
Sbjct: 1492 attggaaaatcggatc 1507
>gnl|LJGI|TC81337 similar to UniRef100_A7P5W5 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 1267
Score = 174 bits (88), Expect = 6e-43
Identities = 100/104 (96%)
Strand = Plus / Minus
Query: 506 aggtaaaaaatataggatttactggcgttttcaggttgatttttaagccgctagttaatg 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 aggtaaaaaatataggatttactggcgttttcaggttgatttttaagccgctagttaatg 876
Query: 566 aatttcctggctttggagcagtttgctattcattaaggcagaag 609
||||||||||||||| |||||| || |||||||| |||||||||
Sbjct: 875 aatttcctggctttgcagcagtatgttattcattgaggcagaag 832
>gnl|LJGI|AV768158 similar to UniRef100_A0JJX5 Cluster: NTMC2Type2.2 protein; n=1;
Arabidopsis thaliana|Rep: NTMC2Type2.2 protein -
Arabidopsis thaliana (Mouse-ear cress), partial (3%)
Length = 539
Score = 89.7 bits (45), Expect = 3e-17
Identities = 74/83 (89%), Gaps = 3/83 (3%)
Strand = Plus / Minus
Query: 426 ggagttagaaatgcagtgggatgggaatcctaatattatacttgatattaaaactctgct 485
|||||||||||||||| |||||||||||| || |||| | |||||| ||||||||||||
Sbjct: 350 ggagttagaaatgcagcgggatgggaatcgtagtattgttcttgatgttaaaactctgc- 292
Query: 486 tggtgttgcactaccagtgcagg 508
|||||||||||||||||||||
Sbjct: 291 --gtgttgcactaccagtgcagg 271
>gnl|LJGI|TC64815 similar to UniRef100_A7PD87 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 867
Score = 89.7 bits (45), Expect = 3e-17
Identities = 74/83 (89%), Gaps = 3/83 (3%)
Strand = Plus / Plus
Query: 426 ggagttagaaatgcagtgggatgggaatcctaatattatacttgatattaaaactctgct 485
|||||||||||||||| |||||||||||| || |||| | |||||| ||||||||||||
Sbjct: 437 ggagttagaaatgcagcgggatgggaatcgtagtattgttcttgatgttaaaactctgc- 495
Query: 486 tggtgttgcactaccagtgcagg 508
|||||||||||||||||||||
Sbjct: 496 --gtgttgcactaccagtgcagg 516
>gnl|LJGI|TC61568 similar to UniRef100_A7QTN2 Cluster: Chromosome chr11 scaffold_170,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_170, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 1227
Score = 79.8 bits (40), Expect = 3e-14
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 773 agttgaagcctgtggggatattagaagtaaaacttgtgcaagcaaaggagttaacaaaca 832
||||||||||||| ||||||||| ||||||| ||||||||||||||||| |||| ||| |
Sbjct: 211 agttgaagcctgtagggatattaaaagtaaagcttgtgcaagcaaaggaattaagaaaga 270
Query: 833 aggatattattggaaaatcggatc 856
|| ||| |||| |||| ||||||
Sbjct: 271 agtatactattcaaaaaccggatc 294
>gnl|LJGI|FS337884 similar to UniRef100_A7QTN2 Cluster: Chromosome chr11 scaffold_170,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_170, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 774
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 786 ggggatattagaagtaaaacttgtgcaagcaaaggagttaacaaacaaggatattattgg 845
|||||||||| ||||||| ||||||||||||||||| |||| ||| ||| ||||||||
Sbjct: 670 ggggatattaaaagtaaagcttgtgcaagcaaaggaattaagaaagaagtatattattct 729
Query: 846 aaaatcggatc 856
|||| ||||||
Sbjct: 730 aaaaccggatc 740
>gnl|LJGI|TC58508 weakly similar to UniRef100_A2DLT2 Cluster: C2 domain containing
protein; n=1; Trichomonas vaginalis G3|Rep: C2 domain
containing protein - Trichomonas vaginalis G3, partial
(23%)
Length = 835
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 786 ggggatattagaagtaaaacttgtgcaagcaaaggagttaacaaacaaggatattattgg 845
|||||||||| ||||||| ||||||||||||||||| |||| ||| ||| ||||||||
Sbjct: 628 ggggatattaaaagtaaagcttgtgcaagcaaaggaattaagaaagaagtatattattct 687
Query: 846 aaaatcggatc 856
|||| ||||||
Sbjct: 688 aaaaccggatc 698