Miyakogusa Predicted Gene
- Lj4g3v1881890.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1881890.2 Non Chatacterized Hit- tr|I1MU54|I1MU54_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,87.23,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; TPR_1,Tetratricopeptide TPR-1;
TPR,Tetratricopeptid,CUFF.49908.2
(2121 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70202 similar to UniRef100_A4Q7K5 Cluster: Immunoglob... 1176 0.0
gnl|LJGI|BP052723 UniRef100_A4Q7K5 Cluster: Immunoglobulin/major... 107 3e-22
>gnl|LJGI|TC70202 similar to UniRef100_A4Q7K5 Cluster: Immunoglobulin/major
histocompatibility complex; Tetratricopeptide- like
helical; n=1; Medicago truncatula|Rep:
Immunoglobulin/major histocompatibility complex;
Tetratricopeptide- like helical - Medicago truncatula
(Barrel medic), partial (23%)
Length = 940
Score = 1176 bits (593), Expect = 0.0
Identities = 593/593 (100%)
Strand = Plus / Plus
Query: 1529 ttgctaatttagcatttgtggagctagaattggacaatcctgtgaaggcactgtcagttg 1588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgctaatttagcatttgtggagctagaattggacaatcctgtgaaggcactgtcagttg 60
Query: 1589 caaaacgtctcctagaacttccagaatgttccaggatttacatctttctaggtcgtgttt 1648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaaacgtctcctagaacttccagaatgttccaggatttacatctttctaggtcgtgttt 120
Query: 1649 atgcagcagaggctctctgcttgctaaacagaccaaaagaagctgctgagctcttgtcaa 1708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgcagcagaggctctctgcttgctaaacagaccaaaagaagctgctgagctcttgtcaa 180
Query: 1709 tttatttgtcagggggaaacgatgttgatttgccattcagccaagaggactgtgagaaat 1768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttatttgtcagggggaaacgatgttgatttgccattcagccaagaggactgtgagaaat 240
Query: 1769 ggcaggcggagaggactgctgaatttgaagaggtaaatggaggatccactgctaccaata 1828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggcaggcggagaggactgctgaatttgaagaggtaaatggaggatccactgctaccaata 300
Query: 1829 attcttcttttgaggacactcgaaggattgttttcctcaaaccagaggaggcacgggcta 1888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attcttcttttgaggacactcgaaggattgttttcctcaaaccagaggaggcacgggcta 360
Query: 1889 caatttatgcaaacttcgcagcattatctgccatgcagggtgaatttgagaaagcaaatg 1948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caatttatgcaaacttcgcagcattatctgccatgcagggtgaatttgagaaagcaaatg 420
Query: 1949 tattggttacgcaggcattgtccatattacccaacagtccagaagccatacttactgcag 2008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tattggttacgcaggcattgtccatattacccaacagtccagaagccatacttactgcag 480
Query: 2009 tttatgtggatctcttggttggcaagccacaggaagctctagccaaattaaaaagttgta 2068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttatgtggatctcttggttggcaagccacaggaagctctagccaaattaaaaagttgta 540
Query: 2069 gccgaattaggttccttcctagtggagtagcattgaataaatcttcttgaatg 2121
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gccgaattaggttccttcctagtggagtagcattgaataaatcttcttgaatg 593
>gnl|LJGI|BP052723 UniRef100_A4Q7K5 Cluster: Immunoglobulin/major histocompatibility
complex; Tetratricopeptide- like helical; n=1;, partial
(2%)
Length = 418
Score = 107 bits (54), Expect = 3e-22
Identities = 61/62 (98%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 2056 ttaaaaagttgtagccgaattaggttccttcctagtggagtag-cattgaataaatcttc 2114
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 418 ttaaaaagttgtagccgaattaggttccttcctagtggagtagccattgaataaatcttc 359
Query: 2115 tt 2116
||
Sbjct: 358 tt 357