Miyakogusa Predicted Gene
- Lj4g3v1881780.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1881780.1 Non Chatacterized Hit- tr|D8RTY6|D8RTY6_SELML
Putative uncharacterized protein OS=Selaginella
moelle,31.66,1e-17,SNAPc_SNAP43,Small nuclear RNA activating complex
(SNAPc), subunit SNAP43; SMALL NUCLEAR RNA ACTIVAT,CUFF.49907.1
(843 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75078 similar to UniRef100_A7PF90 Cluster: Chromosome... 642 0.0
gnl|LJGI|BP068190 204 6e-52
>gnl|LJGI|TC75078 similar to UniRef100_A7PF90 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 470
Score = 642 bits (324), Expect = 0.0
Identities = 344/348 (98%), Gaps = 2/348 (0%)
Strand = Plus / Plus
Query: 1 atgaatattgattatttcaagaaggacattgatgaacttattggtcaattcgctcaggat 60
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 atgaatattgattatggcaagaaggacattgatgaacttattggtcaattcgctcaggat 183
Query: 61 gagtcaacaactctggctgatatgaagagagtatggctttctaagaagttttcctatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gagtcaacaactctggctgatatgaagagagtatggctttctaagaagttttcctatatt 243
Query: 121 tatgaagcttttccttctaccaacctggccttctttatgcaatctctgtatgctcatagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tatgaagcttttccttctaccaacctggccttctttatgcaatctctgtatgctcatagt 303
Query: 181 ataggttacatggttggtgccggttctttatcagtccgactgggcggcctttattgcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ataggttacatggttggtgccggttctttatcagtccgactgggcggcctttattgcctc 363
Query: 241 tactgtctttatgagactcaaccttttaaacctccttttaagatctatctatccc-ttgg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 364 tactgtctttatgagactcaaccttttaaacctccttttaagatctatctatccctttgg 423
Query: 300 agagttaaagaaagtcaggatccttgttgctgatgcaaaagcaaatgc 347
|||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 424 agagttaaagaaagtcaggatccttgttgctgatgc-aaagcaaatgc 470
>gnl|LJGI|BP068190
Length = 338
Score = 204 bits (103), Expect = 6e-52
Identities = 153/163 (93%), Gaps = 5/163 (3%)
Strand = Plus / Minus
Query: 684 aggagatgtctttgaggagattgctaatgattgggttatccagaaacaagca-ttttata 742
||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||
Sbjct: 338 aggagatgtctttgaggagattgctaatgattgggttatccagaacca-gcacttttata 280
Query: 743 aacaaacag-gattaggggaggaggtagcatatgaacaagagc-tggagcagttacttct 800
||| | ||| |||||||||||||||||||||||| || ||| | ||||||||||||||||
Sbjct: 279 aacca-cagcgattaggggaggaggtagcatatgcaccagaccctggagcagttacttct 221
Query: 801 agaggaccgtcatgatggtgaagagtctaatgaagattgaaaa 843
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 agaggaccgtcatgatggtgaagagtctaatgaagattgaaaa 178