Miyakogusa Predicted Gene
- Lj4g3v1881530.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1881530.1 NODE_28862_length_2338_cov_127.045769.path1.1
(1974 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63412 similar to UniRef100_Q9LTF8 Cluster: Similarity... 1576 0.0
gnl|LJGI|TC57602 similar to UniRef100_A7PF84 Cluster: Chromosome... 1538 0.0
gnl|LJGI|AV779018 similar to UniRef100_Q9LTF8 Cluster: Similarit... 622 e-177
gnl|LJGI|DC598095 similar to UniRef100_A7PF84 Cluster: Chromosom... 228 1e-58
gnl|LJGI|AV770298 159 8e-38
>gnl|LJGI|TC63412 similar to UniRef100_Q9LTF8 Cluster: Similarity to GTPase activating
protein; n=1; Arabidopsis thaliana|Rep: Similarity to
GTPase activating protein - Arabidopsis thaliana
(Mouse-ear cress), partial (78%)
Length = 1002
Score = 1576 bits (795), Expect = 0.0
Identities = 798/799 (99%)
Strand = Plus / Plus
Query: 1176 agagtatgaaaccataaagaaccagtggcagagtatctcctcagcacaggctagaagatt 1235
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 agagtatgaaaccataaagaaccagtggcagagtatctcctcagcaccggctagaagatt 60
Query: 1236 cacaaaatttagggaaaggaaagggcttattgagaaagacgtggtgagaactgatagatc 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cacaaaatttagggaaaggaaagggcttattgagaaagacgtggtgagaactgatagatc 120
Query: 1296 actcaatttttatgagggggatgataatccaaatgtgaatgttctgcgagatatcctgtt 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actcaatttttatgagggggatgataatccaaatgtgaatgttctgcgagatatcctgtt 180
Query: 1356 gacatactcattctacaacttcgatcttggttattgtcagggtatgagtgatcttctgtc 1415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gacatactcattctacaacttcgatcttggttattgtcagggtatgagtgatcttctgtc 240
Query: 1416 tccaatactgtttgtgatgggtgatgaatcagaggcattttggtgttttgttgcgttaat 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tccaatactgtttgtgatgggtgatgaatcagaggcattttggtgttttgttgcgttaat 300
Query: 1476 ggagcgccttgggcccaattttaaccgtgaccaaaatggaatgcactctcagctttttgc 1535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggagcgccttgggcccaattttaaccgtgaccaaaatggaatgcactctcagctttttgc 360
Query: 1536 attatcaaagttggtggagctgctggatagtccattgcataactattttaagcagcgtga 1595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attatcaaagttggtggagctgctggatagtccattgcataactattttaagcagcgtga 420
Query: 1596 ctgcttaaattacttcttttgtttccgctgggttttgattcaatttaaaagggagtttga 1655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctgcttaaattacttcttttgtttccgctgggttttgattcaatttaaaagggagtttga 480
Query: 1656 gtacgaggacacaatgcgcttatgggaagtattatggacgcactatccgtccgagcatct 1715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtacgaggacacaatgcgcttatgggaagtattatggacgcactatccgtccgagcatct 540
Query: 1716 acacctctatgtatgtgtggcagtgttgaaacgataccgaaacaaaataataggagagga 1775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acacctctatgtatgtgtggcagtgttgaaacgataccgaaacaaaataataggagagga 600
Query: 1776 aatggacttcgacaccctcttgaagtttattaatgagctaagtggtcacattgacctgga 1835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aatggacttcgacaccctcttgaagtttattaatgagctaagtggtcacattgacctgga 660
Query: 1836 tgcaaccctcagagatgcagaggctctatccatatgtgctggtgagaacggtgcagctcg 1895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgcaaccctcagagatgcagaggctctatccatatgtgctggtgagaacggtgcagctcg 720
Query: 1896 tataccacctggaaccccaccatccttgcctgttgatgatggttcattttacgtccaaca 1955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tataccacctggaaccccaccatccttgcctgttgatgatggttcattttacgtccaaca 780
Query: 1956 agatgatgaagttttgtaa 1974
|||||||||||||||||||
Sbjct: 781 agatgatgaagttttgtaa 799
>gnl|LJGI|TC57602 similar to UniRef100_A7PF84 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 864
Score = 1538 bits (776), Expect = 0.0
Identities = 776/776 (100%)
Strand = Plus / Plus
Query: 1 atgctagaatcagagcttcacgacctctccgacgacgccgattacgccgctgcgtcgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 atgctagaatcagagcttcacgacctctccgacgacgccgattacgccgctgcgtcgcag 148
Query: 61 caacaaggttcttctagcacgatgctacggagcgatagcgccaagcaaagctcatcgtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 caacaaggttcttctagcacgatgctacggagcgatagcgccaagcaaagctcatcgtcc 208
Query: 121 agtgagcgagagggtgctgagattgtgtttttgaaggataatgttgcaattcatccgact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 agtgagcgagagggtgctgagattgtgtttttgaaggataatgttgcaattcatccgact 268
Query: 181 cagttcgccatcagtgggagactcaagttgattaagcaaggcgctgctttgtttatgact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cagttcgccatcagtgggagactcaagttgattaagcaaggcgctgctttgtttatgact 328
Query: 241 tggttgccttacaaaggccatggttcagatgatgggatctctgataaagacagaagcctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tggttgccttacaaaggccatggttcagatgatgggatctctgataaagacagaagcctc 388
Query: 301 tacaccattagtgcggtgcccttcactgacatcaggtccattcggaggcatacccctgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tacaccattagtgcggtgcccttcactgacatcaggtccattcggaggcatacccctgct 448
Query: 361 tttgggtggcaatatatcattgttgttcaatcatcaggacttgctcatcctccactctac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tttgggtggcaatatatcattgttgttcaatcatcaggacttgctcatcctccactctac 508
Query: 421 ttttatagtggaggagtcaaagaattccttgccacagtaaaacaacatgttcttcttgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ttttatagtggaggagtcaaagaattccttgccacagtaaaacaacatgttcttcttgtg 568
Query: 481 agatctgctgaagatgcaaatgtatttcttgtgaatgactttcagaatacactgcagagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 agatctgctgaagatgcaaatgtatttcttgtgaatgactttcagaatacactgcagagg 628
Query: 541 acattgtcttccttggagctgccaagggctgtttctcttgcatgcggaccttcaaataca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 acattgtcttccttggagctgccaagggctgtttctcttgcatgcggaccttcaaataca 688
Query: 601 cctctcaatgaatcctctttgaatgagaaccaggagaacggtgatagtggtgtctataat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 cctctcaatgaatcctctttgaatgagaaccaggagaacggtgatagtggtgtctataat 748
Query: 661 ggaagtgccagtgttcctcagttccatgggaggccaagacataaagttcaagatcctgct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 ggaagtgccagtgttcctcagttccatgggaggccaagacataaagttcaagatcctgct 808
Query: 721 cgggacctctctattcaagttttggagaagttctctcttgtcacaaaatttgcccg 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 cgggacctctctattcaagttttggagaagttctctcttgtcacaaaatttgcccg 864
>gnl|LJGI|AV779018 similar to UniRef100_Q9LTF8 Cluster: Similarity to GTPase activating
protein; n=1; Arabidopsis thaliana|Rep: Similarity to
GTPase activating protein - Arabidopsis thaliana
(Mouse-ear cress), partial (31%)
Length = 508
Score = 622 bits (314), Expect = e-177
Identities = 326/330 (98%)
Strand = Plus / Minus
Query: 1645 agggagtttgagtacgaggacacaatgcgcttatgggaagtattatggacgcactatccg 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 agggagtttgagtacgaggacacaatgcgcttatgggaagtattatggacgcactatccg 379
Query: 1705 tccgagcatctacacctctatgtatgtgtggcagtgttgaaacgataccgaaacaaaata 1764
||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 378 tccgagcatgtacacctctatgtatgtgtggcagtgttgaaacgataccgaaaccaaatc 319
Query: 1765 ataggagaggaaatggacttcgacaccctcttgaagtttattaatgagctaagtggtcac 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ataggagaggaaatggacttcgacaccctcttgaagtttattaatgagctaagtggtcac 259
Query: 1825 attgacctggatgcaaccctcagagatgcagaggctctatccatatgtgctggtgagaac 1884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 attgacctggatgcaaccctcagagatgcagaggctctatccatatgtgctggtgagaac 199
Query: 1885 ggtgcagctcgtataccacctggaaccccaccatccttgcctgttgatgatggttcattt 1944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ggtgcagctcgtataccacctggaaccccaccatccttgcctgttgatgatggttcattt 139
Query: 1945 tacgtccaacaagatgatgaagttttgtaa 1974
|||||||||| |||||||||||||||||||
Sbjct: 138 tacgtccaaccagatgatgaagttttgtaa 109
>gnl|LJGI|DC598095 similar to UniRef100_A7PF84 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 437
Score = 228 bits (115), Expect = 1e-58
Identities = 118/119 (99%)
Strand = Plus / Plus
Query: 1278 ggtgagaactgatagatcactcaatttttatgagggggatgataatccaaatgtgaatgt 1337
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 8 ggtgagaactgatagatcactcaatttttaggagggggatgataatccaaatgtgaatgt 67
Query: 1338 tctgcgagatatcctgttgacatactcattctacaacttcgatcttggttattgtcagg 1396
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tctgcgagatatcctgttgacatactcattctacaacttcgatcttggttattgtcagg 126
>gnl|LJGI|AV770298
Length = 359
Score = 159 bits (80), Expect = 8e-38
Identities = 118/128 (92%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 1828 gacctggatgcaaccctcagagatgcagaggctctatccatatgtgctggtgagaacggt 1887
|||||||||||||||||||||||||| |||||| |||| |||||||||||||| |||||
Sbjct: 359 gacctggatgcaaccctcagagatgccgaggctttatcactatgtgctggtgaggacggt 300
Query: 1888 gcagctcgtataccac-ctggaaccccacca-tccttgcctgttgatgatggttcatttt 1945
|| |||||||| |||| |||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 299 gccgctcgtattccacactgggaccccaccactccttgcctgttgatgatggttcatttt 240
Query: 1946 acgtccaa 1953
||||||||
Sbjct: 239 acgtccaa 232