Miyakogusa Predicted Gene
- Lj4g3v1881240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1881240.1 Non Chatacterized Hit- tr|F6HXD5|F6HXD5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,55.7,9e-18,seg,NULL; Cupredoxins,Cupredoxin;
PHYTOCYANIN,Plastocyanin-like; no description,Cupredoxin;
Cu_bind_,CUFF.49875.1
(285 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60432 weakly similar to UniRef100_Q41001 Cluster: Blu... 337 2e-92
gnl|LJGI|TC59439 weakly similar to UniRef100_Q9M510 Cluster: Dic... 218 1e-56
gnl|LJGI|TC72876 weakly similar to UniRef100_P42849 Cluster: Ume... 119 1e-26
gnl|LJGI|GO011795 similar to UniRef100_Q00M69 Cluster: Zinc fing... 90 9e-18
gnl|LJGI|BW594687 74 5e-13
>gnl|LJGI|TC60432 weakly similar to UniRef100_Q41001 Cluster: Blue copper protein
precursor; n=1; Pisum sativum|Rep: Blue copper protein
precursor - Pisum sativum (Garden pea), partial (33%)
Length = 816
Score = 337 bits (170), Expect = 2e-92
Identities = 256/285 (89%), Gaps = 6/285 (2%)
Strand = Plus / Plus
Query: 1 atggcaatgaacatgaacgctctcctccttgcgcttcttgctgcaaccaccttgttccac 60
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 95 atggcaatgaacatgaacgctctcctccttgcgcttcttgcagcaaccgccttgttccac 154
Query: 61 gcctcatcagctcagaccagacacgtcgtgggtaattccaccggctggagggtccctacc 120
||||||||||||||||||||||||||| ||| |||| | |||||| ||||||
Sbjct: 155 tgctcatcagctcagaccagacacgtcgttggtgattcagcaggctggttcgtccct--- 211
Query: 121 aacggtggcgcttcattctacaccagttgggctgccaacaatagcttcaccgttggtgac 180
||| | |||||||||||||||| ||||||||||| |||| |||| | || || |||
Sbjct: 212 ---ggtaacacttcattctacaccagctgggctgccaagaataccttcgctgtcggcgac 268
Query: 181 actctcgtgttcaactacgcaacaagtgcacacaacgtagaggaagtgacaaagacaaat 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 269 actctcgtgttcaactacgcagcaagtgcacacaacgtagaggaagtgacaaagacaaat 328
Query: 241 tacgattcttgcaactcaacatctccaattgcaacttacaccacc 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tacgattcttgcaactcaacatctccaattgcaacttacaccacc 373
>gnl|LJGI|TC59439 weakly similar to UniRef100_Q9M510 Cluster: Dicyanin; n=1; Solanum
lycopersicum|Rep: Dicyanin - Solanum lycopersicum
(Tomato) (Lycopersicon esculentum), partial (52%)
Length = 1394
Score = 218 bits (110), Expect = 1e-56
Identities = 175/196 (89%), Gaps = 3/196 (1%)
Strand = Plus / Plus
Query: 1 atggcaatgaacatgaacgctctcctccttgcgcttcttgctgcaaccaccttgttccac 60
||||||| ||||||||| | ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 115 atggcaaggaacatgaatgttctcctccttgcgcttcttgcagcaaccaccttgttccac 174
Query: 61 gcctcatcagctcagaccagacacgtcgtgggtaattccaccggctggagggtccctacc 120
||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||
Sbjct: 175 acctcatcagctcagaccagacacgttgtgggtgattccaccggctggaccatccctac- 233
Query: 121 aacggtggcgcttcattctacaccagttgggctgccaacaatagcttcaccgttggtgac 180
||| ||||||||||||||||||| |||||||||||||| | |||| |||| || |||
Sbjct: 234 --cggcggcgcttcattctacaccaactgggctgccaacaaaaccttctccgtcggcgac 291
Query: 181 actctcgtgttcaact 196
||||||||||||||||
Sbjct: 292 actctcgtgttcaact 307
Score = 155 bits (78), Expect = 2e-37
Identities = 105/114 (92%)
Strand = Plus / Plus
Query: 172 gttggtgacactctcgtgttcaactacgcaacaagtgcacacaacgtagaggaagtgaca 231
||||| |||| ||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 772 gttggagacattctagtgttcaactacgcagcaagtgcacacaacgtagaggaagtgaca 831
Query: 232 aagacaaattacgattcttgcaactcaacatctccaattgcaacttacaccacc 285
||| ||| || |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 832 aagcaaaagtatgattcttgcaactcaacatctccaatcgcaacttacaccacc 885
>gnl|LJGI|TC72876 weakly similar to UniRef100_P42849 Cluster: Umecyanin; n=1;
Armoracia rusticana|Rep: Umecyanin - Armoracia rusticana
(Horseradish) (Armoracia laphatifolia), partial (37%)
Length = 647
Score = 119 bits (60), Expect = 1e-26
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 198 cgcaacaagtgcacacaacgtagaggaagtgacaaagacaaattacgattcttgcaactc 257
|||| ||||||||||||| |||||||||||||||||| ||| || ||||||||||||||
Sbjct: 1 cgcagcaagtgcacacaaggtagaggaagtgacaaagcaaaagtatgattcttgcaactc 60
Query: 258 aacatctccaattgcaacttacaccacc 285
|||||||||||| |||||||||||||||
Sbjct: 61 aacatctccaatcgcaacttacaccacc 88
>gnl|LJGI|GO011795 similar to UniRef100_Q00M69 Cluster: Zinc finger protein; n=1;
Glycine max|Rep: Zinc finger protein - Glycine max
(Soybean), partial (17%)
Length = 600
Score = 89.7 bits (45), Expect = 9e-18
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 1 atggcaatgaacatgaacgctctcctccttgcgcttcttgctgcaaccaccttgttccac 60
||||||| ||||||||| | ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 108 atggcaaggaacatgaatgttctcctccttgcgcttcttgcagcaaccaccttgttccac 167
Query: 61 gcctc 65
||||
Sbjct: 168 acctc 172
>gnl|LJGI|BW594687
Length = 465
Score = 73.8 bits (37), Expect = 5e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 187 gtgttcaactacgcaacaagtgcacacaacgtagaggaagt 227
||||||||||||||| |||||||||||||||||||||||||
Sbjct: 425 gtgttcaactacgcagcaagtgcacacaacgtagaggaagt 465