Miyakogusa Predicted Gene

Lj4g3v1880950.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1880950.1 tr|F2E072|F2E072_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,57.69,0.000000000000002,seg,NULL,CUFF.49860.1
         (696 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59285 similar to UniRef100_A7PF69 Cluster: Chromosome...  1114   0.0  
gnl|LJGI|TC78098 similar to UniRef100_A7PFZ9 Cluster: Chromosome...    52   5e-06
gnl|LJGI|TC72970 similar to UniRef100_A7Q2A6 Cluster: Chromosome...    52   5e-06

>gnl|LJGI|TC59285 similar to UniRef100_A7PF69 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (76%)
          Length = 768

 Score = 1114 bits (562), Expect = 0.0
 Identities = 568/570 (99%)
 Strand = Plus / Plus

                                                                       
Query: 127 gtgaaaaggcaattaactctttgcaaagcagtgaaccagacagcacttccaactttgacc 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   gtgaaaaggcaattaactctttgcaaagcagtgaaccagacagcacttccaactttgacc 61

                                                                       
Query: 187 aaaagagacttgtccatcagttttttcaccagctttgtgctttcattggctggtaagggg 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  aaaagagacttgtccatcagttttttcaccagctttgtgctttcattggctggtaagggg 121

                                                                       
Query: 247 tgcttggatgccaatgcagcaatacttgaggcagatgatgatctggagctcttggaaaaa 306
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 122 tgcttggatgccaatgcagcaatacttgaggcagatggtgatctggagctcttggaaaaa 181

                                                                       
Query: 307 gtaaagaaggatagaaagaagagacttgagaaacaaggtgtgatcagttcatccaccaaa 366
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gtaaagagggatagaaagaagagacttgagaaacaaggtgtgatcagttcatccaccaaa 241

                                                                       
Query: 367 gaaacagggtatcttcaggatgtggtgtacaaactgagtgaagttggtcaagcaattgaa 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gaaacagggtatcttcaggatgtggtgtacaaactgagtgaagttggtcaagcaattgaa 301

                                                                       
Query: 427 aacaatgatctatctacagctggttctgtctttgggagaggcaaggatactgattgggtc 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aacaatgatctatctacagctggttctgtctttgggagaggcaaggatactgattgggtc 361

                                                                       
Query: 487 caaaaagctaacatagctctgaacaagctaagttccagtcctgaagaaaagtctgaggcg 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 caaaaagctaacatagctctgaacaagctaagttccagtcctgaagaaaagtctgaggcg 421

                                                                       
Query: 547 gatacattcagctcttcgatagcttcattgatttcatcagtttcacagaaagatgttgag 606
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gatacattcagctcttcgatagcttcattgatttcatcagtttcacagaaagatgttgag 481

                                                                       
Query: 607 tcatccaaactggcctttgtgtcttcggccagcgcatttgagaagtggacctccttgaca 666
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tcatccaaactggcctttgtgtcttcggccagcgcatttgagaagtggacctccttgaca 541

                                         
Query: 667 gggctggttgctcagcttaaggggctttga 696
           ||||||||||||||||||||||||||||||
Sbjct: 542 gggctggttgctcagcttaaggggctttga 571


>gnl|LJGI|TC78098 similar to UniRef100_A7PFZ9 Cluster: Chromosome chr6 scaffold_15,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_15, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (70%)
          Length = 1321

 Score = 52.0 bits (26), Expect = 5e-06
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 32  cattccttctaccatcatcttcatcatcac 61
           ||||||||||| ||||||||||||||||||
Sbjct: 815 cattccttctatcatcatcttcatcatcac 786


>gnl|LJGI|TC72970 similar to UniRef100_A7Q2A6 Cluster: Chromosome chr13 scaffold_45,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_45, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 790

 Score = 52.0 bits (26), Expect = 5e-06
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 32  cattccttctaccatcatcttcatcatcac 61
           ||||||||||| ||||||||||||||||||
Sbjct: 307 cattccttctatcatcatcttcatcatcac 278