Miyakogusa Predicted Gene
- Lj4g3v1880730.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1880730.1 tr|B9HAJ3|B9HAJ3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_819088 PE=4
SV=1,46.27,3e-19,seg,NULL,CUFF.49825.1
(602 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66484 similar to UniRef100_A7QIP2 Cluster: Chromosome... 1108 0.0
gnl|LJGI|BW624601 similar to UniRef100_A9ALP5 Cluster: Transcrip... 745 0.0
gnl|LJGI|FS359927 similar to UniRef100_A7PF56 Cluster: Chromosom... 291 3e-78
gnl|LJGI|TC66998 homologue to UniRef100_Q5Z5Q8 Cluster: Adsorpti... 143 1e-33
>gnl|LJGI|TC66484 similar to UniRef100_A7QIP2 Cluster: Chromosome chr9 scaffold_104,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_104, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 1290
Score = 1108 bits (559), Expect = 0.0
Identities = 562/563 (99%)
Strand = Plus / Plus
Query: 1 atgcttcttcaaagctcttcaactccgatcatgaactcgttccttcctcactcgaaggat 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 atgcttcttcaaatctcttcaactccgatcatgaactcgttccttcctcactcgaaggat 205
Query: 61 ccatctaccgaacccgaacaccttcatcggatcccgagaacccgatccgtcacgctttcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ccatctaccgaacccgaacaccttcatcggatcccgagaacccgatccgtcacgctttcg 265
Query: 121 ggttcctggtcgccgatcgaaggtcgccggagcagaatgacaagagcgctatcggaaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ggttcctggtcgccgatcgaaggtcgccggagcagaatgacaagagcgctatcggaaacc 325
Query: 181 gatctcaccgccgcaccgaagcggaagcctcccagccacggcctcttcgatgaggacgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gatctcaccgccgcaccgaagcggaagcctcccagccacggcctcttcgatgaggacgag 385
Query: 241 ggtaaagcgagcaccctcgctgcccgttcgagaacgacgtcgttgggtcctgcgttgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ggtaaagcgagcaccctcgctgcccgttcgagaacgacgtcgttgggtcctgcgttgttt 445
Query: 301 tctttctccgagctggaggaaggtgtgagcgggattggtgtaagggatgaaggtctgctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tctttctccgagctggaggaaggtgtgagcgggattggtgtaagggatgaaggtctgctg 505
Query: 361 gcgtcgcgtgtgttggttgagggtggaggcggaggcggaggaggccgcggcggtggatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gcgtcgcgtgtgttggttgagggtggaggcggaggcggaggaggccgcggcggtggatgg 565
Query: 421 gaccggagcgacggtggaggttctgggttttgggataagaatcatgggagtgatagtacg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gaccggagcgacggtggaggttctgggttttgggataagaatcatgggagtgatagtacg 625
Query: 481 gacttgtattaccggacgatgatcgaagccaatccagggaacccgctttttcttagcaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gacttgtattaccggacgatgatcgaagccaatccagggaacccgctttttcttagcaac 685
Query: 541 tacgcaaggtacttgaaagaggt 563
|||||||||||||||||||||||
Sbjct: 686 tacgcaaggtacttgaaagaggt 708
>gnl|LJGI|BW624601 similar to UniRef100_A9ALP5 Cluster: Transcriptional regulator,
LysR family; n=1; Burkholderia multivorans ATCC
17616|Rep: Transcriptional regulator, LysR family -
Burkholderia multivorans ATCC 17616, partial (5%)
Length = 522
Score = 745 bits (376), Expect = 0.0
Identities = 379/380 (99%)
Strand = Plus / Plus
Query: 1 atgcttcttcaaagctcttcaactccgatcatgaactcgttccttcctcactcgaaggat 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 atgcttcttcaaatctcttcaactccgatcatgaactcgttccttcctcactcgaaggat 202
Query: 61 ccatctaccgaacccgaacaccttcatcggatcccgagaacccgatccgtcacgctttcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ccatctaccgaacccgaacaccttcatcggatcccgagaacccgatccgtcacgctttcg 262
Query: 121 ggttcctggtcgccgatcgaaggtcgccggagcagaatgacaagagcgctatcggaaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ggttcctggtcgccgatcgaaggtcgccggagcagaatgacaagagcgctatcggaaacc 322
Query: 181 gatctcaccgccgcaccgaagcggaagcctcccagccacggcctcttcgatgaggacgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gatctcaccgccgcaccgaagcggaagcctcccagccacggcctcttcgatgaggacgag 382
Query: 241 ggtaaagcgagcaccctcgctgcccgttcgagaacgacgtcgttgggtcctgcgttgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggtaaagcgagcaccctcgctgcccgttcgagaacgacgtcgttgggtcctgcgttgttt 442
Query: 301 tctttctccgagctggaggaaggtgtgagcgggattggtgtaagggatgaaggtctgctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tctttctccgagctggaggaaggtgtgagcgggattggtgtaagggatgaaggtctgctg 502
Query: 361 gcgtcgcgtgtgttggttga 380
||||||||||||||||||||
Sbjct: 503 gcgtcgcgtgtgttggttga 522
>gnl|LJGI|FS359927 similar to UniRef100_A7PF56 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 696
Score = 291 bits (147), Expect = 3e-78
Identities = 147/147 (100%)
Strand = Plus / Minus
Query: 415 ggatgggaccggagcgacggtggaggttctgggttttgggataagaatcatgggagtgat 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 ggatgggaccggagcgacggtggaggttctgggttttgggataagaatcatgggagtgat 637
Query: 475 agtacggacttgtattaccggacgatgatcgaagccaatccagggaacccgctttttctt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 agtacggacttgtattaccggacgatgatcgaagccaatccagggaacccgctttttctt 577
Query: 535 agcaactacgcaaggtacttgaaagag 561
|||||||||||||||||||||||||||
Sbjct: 576 agcaactacgcaaggtacttgaaagag 550
>gnl|LJGI|TC66998 homologue to UniRef100_Q5Z5Q8 Cluster: Adsorption protein-like;
n=1; Oryza sativa Japonica Group|Rep: Adsorption
protein-like - Oryza sativa subsp. japonica (Rice),
partial (10%)
Length = 809
Score = 143 bits (72), Expect = 1e-33
Identities = 129/148 (87%)
Strand = Plus / Minus
Query: 250 agcaccctcgctgcccgttcgagaacgacgtcgttgggtcctgcgttgttttctttctcc 309
|||||||||||||||| |||||||||||||| |||||||||| | |||||||||||||||
Sbjct: 221 agcaccctcgctgcccattcgagaacgacgttgttgggtcctactttgttttctttctcc 162
Query: 310 gagctggaggaaggtgtgagcgggattggtgtaagggatgaaggtctgctggcgtcgcgt 369
||| |||| |||| || || |||||||| || |||| ||||| ||| |||||||||||
Sbjct: 161 gagttggatgaagttgagacaaggattggtatatgggacgaagggctgttggcgtcgcgt 102
Query: 370 gtgttggttgagggtggaggcggaggcg 397
|| ||||||| ||| |||||||||||||
Sbjct: 101 gtcttggttgtgggaggaggcggaggcg 74