Miyakogusa Predicted Gene

Lj4g3v1879170.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1879170.1 tr|A9RWM8|A9RWM8_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,65.08,7e-18,DnaJ/Hsp40 cysteine-rich domain,Heat shock
protein DnaJ, cysteine-rich domain; no description,Heat s,CUFF.49791.1
         (369 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61982 similar to UniRef100_A7P5S3 Cluster: Chromosome...   698   0.0  

>gnl|LJGI|TC61982 similar to UniRef100_A7P5S3 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (56%)
          Length = 730

 Score =  698 bits (352), Expect = 0.0
 Identities = 369/375 (98%), Gaps = 6/375 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctcactctctgagttttgctcctatttgttctttgaaatcttcaaacagaattg-- 58
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 92  atggctcactctctgagttttgctcctatttgttctttgaaatcttcaaacagaattgga 151

                                                                       
Query: 59  ----ttaccggtaattcggttgcccgaacggcttttccgatgaaggaagcatgtcagaat 114
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 gcagttaccggtaattcggttgcccgaacggcttttccgatgaaggaagcatgtcagaat 211

                                                                       
Query: 115 tctaaagctcgaaactttcagtctttggaggttaaggctacagatgataaaactccaagc 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 tctaaagctcgaaactttcagtctttggaggttaaggctacagatgataaaactccaagc 271

                                                                       
Query: 175 acaaaagcaaggagcattgtttgtgctgattgtgatgggaatggtgcaatattatgcact 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 acaaaagcaaggagcattgtttgtgctgattgtgatgggaatggtgcaatattatgcact 331

                                                                       
Query: 235 caatgccaaggtaatggagttaatttggtagatcacttcaatggacgatataaagcgggt 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 caatgccaaggtaatggagttaatttggtagatcacttcaatggacgatataaagcgggt 391

                                                                       
Query: 295 ggattatgctggctatgcaggggtaaaaaggatattctgtgtggaagttgtaatggggct 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ggattatgctggctatgcaggggtaaaaaggatattctgtgtggaagttgtaatggggct 451

                          
Query: 355 ggttttattggagga 369
           |||||||||||||||
Sbjct: 452 ggttttattggagga 466