Miyakogusa Predicted Gene
- Lj4g3v1877060.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1877060.1 Non Chatacterized Hit- tr|I1GXJ6|I1GXJ6_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,32.61,2e-17,Mito_carr,Mitochondrial substrate/solute carrier;
SOLCAR,Mitochondrial substrate/solute carrier; no
,NODE_20882_length_1921_cov_46.763664.path2.1
(1224 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO025947 similar to UniRef100_A7P5R3 Cluster: Chromosom... 955 0.0
gnl|LJGI|TC80755 similar to UniRef100_A7P5R3 Cluster: Chromosome... 105 6e-22
gnl|LJGI|TC77824 homologue to UniRef100_A7P5R3 Cluster: Chromoso... 60 3e-08
>gnl|LJGI|GO025947 similar to UniRef100_A7P5R3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 750
Score = 955 bits (482), Expect = 0.0
Identities = 520/526 (98%), Gaps = 5/526 (0%)
Strand = Plus / Plus
Query: 1 atgggtggaagaaaggtgcaagtgcaaggtttagattctggttataaagataaagatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 230 atgggtggaagaaaggtgcaagtgcaaggtttagattctggttataaagatgaagatgta 289
Query: 61 gtgataagcagctctggaataaagcttgaatgggattcacatggtggcaatgttcatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gtgataagcagctctggaataaagcttgaatgggattcacatggtggcaatgttcatcca 349
Query: 121 actggcttatttgcaagcgttggtcaagcaggatttggaattgggatttcaccaaatcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 actggcttatttgcaagcgttggtcaagcaggatttggaattgggatttcaccaaatcct 409
Query: 181 cctctaactgctagagacagtggcgccaaacttccacttgtgaattcttccatgcaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 cctctaactgctagagacagtggcgccaaacttccacttgtgaattcttccatgcaatat 469
Query: 241 gttttaatgcctgaaactggttttcgagctgcggggattcaaggattattgaatggtgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gttttaatgcctgaaactggttttcgagctgcggggattcaaggattattgaatggtgag 529
Query: 301 gttgctgaggaaggtcttgcattgaaggggaaaaagatgaaggggtttaagttgaaattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gttgctgaggaaggtcttgcattgaaggggaaaaagatgaaggggtttaagttgaaattt 589
Query: 361 aagattgcaaacccttcactaagaaggttgatgagtggagcaattgctggtgctgtgtca 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 590 aagattgcaaacccttcactaagaa-gttgatgagtggagcaattgctggtgctgtgtca 648
Query: 421 agaactgtggtggcgccattggagacgataaggactcatttgatggtggggagctgtggc 480
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 649 agaactgtggtggcgccattggagacgataa-gactcatttgatggtggggagctgtggc 707
Query: 481 cataatagtgctcaggtgtttcaatctatcatgcaagctgatggat 526
|||||||||||||| ||||||| ||||||||||| |||||||||||
Sbjct: 708 cataatagtgctca-gtgtttc-atctatcatgc-agctgatggat 750
>gnl|LJGI|TC80755 similar to UniRef100_A7P5R3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (79%)
Length = 1662
Score = 105 bits (53), Expect = 6e-22
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 1108 ggtttgtatagaggattgggaccaagctgcttgaagttagttcctgctgctggaatctct 1167
|||||||||||||| ||||||||||||||| ||||||| || || ||||| |||||||||
Sbjct: 1269 ggtttgtatagagggttgggaccaagctgcatgaagttggtgccagctgcaggaatctct 1328
Query: 1168 ttcatgtgttatgaagcttgcaaga 1192
|||||||| |||||||| |||||||
Sbjct: 1329 ttcatgtgctatgaagcctgcaaga 1353
Score = 93.7 bits (47), Expect = 2e-18
Identities = 134/163 (82%)
Strand = Plus / Plus
Query: 429 ggtggcgccattggagacgataaggactcatttgatggtggggagctgtggccataatag 488
||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 587 ggtggcgccgttggagacgataaggactcatttgatggttgggagtagtggccattccag 646
Query: 489 tgctcaggtgtttcaatctatcatgcaagctgatggatggaagggcttgttcagaggcaa 548
|| | |||||||| | ||||||| | |||||| |||||||| ||||| || |||||
Sbjct: 647 tggtgaggtgtttaataatatcatgaagagtgatgggtggaaggggttgtttaggggcaa 706
Query: 549 ttttgtaaacatcatccgagttgcgccaagcaaggctattgag 591
|||||| || |||| || ||||| || |||||||| ||||||
Sbjct: 707 ttttgttaatgtcattcgtgttgcacctagcaaggccattgag 749
>gnl|LJGI|TC77824 homologue to UniRef100_A7P5R3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (28%)
Length = 574
Score = 60.0 bits (30), Expect = 3e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 1124 tgggaccaagctgcttgaagttagttcctgctgctggaatctctttcatgtgttatgaag 1183
||||||| || ||| ||||||| || || || || |||||||||||||||||||||||||
Sbjct: 287 tgggacctagttgcatgaagttggtgccggccgccggaatctctttcatgtgttatgaag 346
Query: 1184 cttgca 1189
| ||||
Sbjct: 347 catgca 352