Miyakogusa Predicted Gene
- Lj4g3v1877020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1877020.1 tr|G7JCV8|G7JCV8_MEDTR F-box/kelch-repeat protein
OS=Medicago truncatula GN=MTR_4g114110 PE=4 SV=1,93.11,0,Kelch
motif,NULL; F-box domain,F-box domain, cyclin-like; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,gene.g55632.t1.1
(1270 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76203 similar to UniRef100_A7PF14 Cluster: Chromosome... 860 0.0
gnl|LJGI|TC81027 similar to UniRef100_A7PF14 Cluster: Chromosome... 751 0.0
gnl|LJGI|TC60410 similar to UniRef100_Q93W93 Cluster: F-box/Kelc... 78 2e-13
gnl|LJGI|TC63313 similar to UniRef100_Q93W93 Cluster: F-box/Kelc... 56 6e-07
>gnl|LJGI|TC76203 similar to UniRef100_A7PF14 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 1070
Score = 860 bits (434), Expect = 0.0
Identities = 434/434 (100%)
Strand = Plus / Plus
Query: 837 gccagagaatgatagctggtaccctgtttatgatggaatggtttctggctggaggaaccc 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccagagaatgatagctggtaccctgtttatgatggaatggtttctggctggaggaaccc 60
Query: 897 tagcactaccctaaatggacagctctatgccttagactgcaaggatggctgcaaacttag 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagcactaccctaaatggacagctctatgccttagactgcaaggatggctgcaaacttag 120
Query: 957 agtttatgatgagggtagtgattcatggagcaagcatattgacagtaaaatgcatttggg 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtttatgatgagggtagtgattcatggagcaagcatattgacagtaaaatgcatttggg 180
Query: 1017 gaactcgcgggccttggaggctgctgctcttgtccctctcaatggaaaactatgtatcat 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaactcgcgggccttggaggctgctgctcttgtccctctcaatggaaaactatgtatcat 240
Query: 1077 ccggaataatatgagcatttccctggttgatgtctcaaaaatagaagatttgaaaggatc 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccggaataatatgagcatttccctggttgatgtctcaaaaatagaagatttgaaaggatc 300
Query: 1137 ttctgctgaacagttatgggaaacgattgccggtaaaggacagttcaagaccttggtcac 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttctgctgaacagttatgggaaacgattgccggtaaaggacagttcaagaccttggtcac 360
Query: 1197 caatctttggtctagtctcgccgggagaaaccgactcaaaagtcacatagttcactgtca 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caatctttggtctagtctcgccgggagaaaccgactcaaaagtcacatagttcactgtca 420
Query: 1257 ggttcttcaagctt 1270
||||||||||||||
Sbjct: 421 ggttcttcaagctt 434
>gnl|LJGI|TC81027 similar to UniRef100_A7PF14 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 1011
Score = 751 bits (379), Expect = 0.0
Identities = 379/379 (100%)
Strand = Plus / Plus
Query: 12 ggttgatacgactgcatgtttatgcagagtagatacaggcctgaaaactgttgctggggc 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 ggttgatacgactgcatgtttatgcagagtagatacaggcctgaaaactgttgctggggc 692
Query: 72 aaggaggtatgtccctggaacaaagctttgtcttcggcctgacattaaaccgtccattca 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 aaggaggtatgtccctggaacaaagctttgtcttcggcctgacattaaaccgtccattca 752
Query: 132 cccaactagaagcaagccggcacgcggtgaccgaagccgcaatcaatcccctctacttcc 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 cccaactagaagcaagccggcacgcggtgaccgaagccgcaatcaatcccctctacttcc 812
Query: 192 tggactccctgatgatcttgctattgcttgcctaattcgagtcccacgggttgatcaccg 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 tggactccctgatgatcttgctattgcttgcctaattcgagtcccacgggttgatcaccg 872
Query: 252 taaacttcggctagtctgcaaaagatggtatcgtcttttggttggtaacttcttttattc 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 taaacttcggctagtctgcaaaagatggtatcgtcttttggttggtaacttcttttattc 932
Query: 312 tctccgcaagagtcttggaatttcagaagagtggatatatgtcattaagagagaccgaga 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 tctccgcaagagtcttggaatttcagaagagtggatatatgtcattaagagagaccgaga 992
Query: 372 tgggaaaatctcgtggcat 390
|||||||||||||||||||
Sbjct: 993 tgggaaaatctcgtggcat 1011
>gnl|LJGI|TC60410 similar to UniRef100_Q93W93 Cluster: F-box/Kelch-repeat protein
At1g55270; n=1; Arabidopsis thaliana|Rep:
F-box/Kelch-repeat protein At1g55270 - Arabidopsis
thaliana (Mouse-ear cress), partial (41%)
Length = 805
Score = 77.8 bits (39), Expect = 2e-13
Identities = 250/319 (78%), Gaps = 1/319 (0%)
Strand = Plus / Plus
Query: 190 cctggactccctgatgatcttgctattgcttgcctaattcgagtcccacgggttgatcac 249
||||| || ||||||||||||||||||||||| | ||||| || || ||||||| |||
Sbjct: 488 cctggtcttcctgatgatcttgctattgcttgtttgattcgtgtacccagggttgagcac 547
Query: 250 cgtaaacttcggctagtctgcaaaagatggtatcgtcttttggttggtaacttcttttat 309
| ||||| || | || ||||| |||||||| || || || ||| || ||||| |||
Sbjct: 548 aggaaactgcgtttggtttgcaagagatggtaccgcctcctgtctggaaatttcttctat 607
Query: 310 tctctccgcaagagtcttggaatttcagaagagtggatatatgtcattaagagagaccga 369
|| ||| | || ||||||||||| ||||||| ||| | |||||||| || ||||||||
Sbjct: 608 tcgctcaggaaaagtcttggaatggcagaagaatgggtttatgtcatcaa-agagaccgt 666
Query: 370 gatgggaaaatctcgtggcatgcttttgatcctgtgtaccaattatggcagcccctgcct 429
|| || | ||| || | ||||||||||||||| | |||||| ||||||| |||| ||
Sbjct: 667 gagggaagaatttcattgcatgcttttgatcccatttaccaactatggcaatcccttccg 726
Query: 430 cctgttcctaaggaatattctggagctcttggttttggctgtgctgttctcaatgggtgc 489
||||||||| ||||||||||| ||| | || ||| ||||||| ||||| | ||| ||
Sbjct: 727 cctgttcctggggaatattctgaagcattgggatttagctgtgccgttcttagtggttgt 786
Query: 490 cacctctacctgtttggcg 508
||| | ||| |||||||||
Sbjct: 787 cacttgtacttgtttggcg 805
Score = 60.0 bits (30), Expect = 4e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 39 agtagatacaggcctgaaaactgttgctggggcaagga 76
||||||| ||||||||||||| ||||||||||||||||
Sbjct: 343 agtagattcaggcctgaaaacagttgctggggcaagga 380
>gnl|LJGI|TC63313 similar to UniRef100_Q93W93 Cluster: F-box/Kelch-repeat protein
At1g55270; n=1; Arabidopsis thaliana|Rep:
F-box/Kelch-repeat protein At1g55270 - Arabidopsis
thaliana (Mouse-ear cress), partial (25%)
Length = 698
Score = 56.0 bits (28), Expect = 6e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1237 agtcacatagttcactgtcaggttcttcaagc 1268
|||||||| |||||||||||||||||||||||
Sbjct: 312 agtcacattgttcactgtcaggttcttcaagc 343
Score = 54.0 bits (27), Expect = 2e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 1036 gctgctgctcttgtccctctcaatggaaaactatgtatcatccggaataatatgagcat 1094
|||||||||||||| || || |||||||| ||||| || ||||| || |||||||||||
Sbjct: 114 gctgctgctcttgttccccttaatggaaagctatgcattatccgcaacaatatgagcat 172