Miyakogusa Predicted Gene
- Lj4g3v1876860.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1876860.1 gene.g55629.t1.1
(357 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60013 weakly similar to UniRef100_A7QIS6 Cluster: Chr... 486 e-137
gnl|LJGI|DC596370 similar to UniRef100_A7QE15 Cluster: Chromosom... 70 1e-11
gnl|LJGI|TC71036 similar to UniRef100_A7QE15 Cluster: Chromosome... 70 1e-11
gnl|LJGI|TC67422 similar to UniRef100_A7QIS6 Cluster: Chromosome... 50 9e-06
>gnl|LJGI|TC60013 weakly similar to UniRef100_A7QIS6 Cluster: Chromosome chr9
scaffold_104, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_104, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (88%)
Length = 732
Score = 486 bits (245), Expect = e-137
Identities = 245/245 (100%)
Strand = Plus / Plus
Query: 113 cagtggagaataaactgcagcaattgaagatagagtatgtgaagagcaaagtagaggaaa 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cagtggagaataaactgcagcaattgaagatagagtatgtgaagagcaaagtagaggaaa 442
Query: 173 gcggaatctatgttgatcagttattcttccatgacccagatggctccatgattgaaatct 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gcggaatctatgttgatcagttattcttccatgacccagatggctccatgattgaaatct 502
Query: 233 gcaactgtgacagcatcccagtagtgcctttatcagaggataaagtatggtcttgctcgc 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gcaactgtgacagcatcccagtagtgcctttatcagaggataaagtatggtcttgctcgc 562
Query: 293 gtttcaattgcaatattcaaaatcaacatcaccagcaccagattcaacaaatgatcccaa 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gtttcaattgcaatattcaaaatcaacatcaccagcaccagattcaacaaatgatcccaa 622
Query: 353 tgtag 357
|||||
Sbjct: 623 tgtag 627
Score = 101 bits (51), Expect = 3e-21
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 1 atgcccaagcatgctcatattaatccaaaggacaaccacatctctttccaa 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 atgcccaagcatgctcatattaatccaaaggacaaccacatctctttccaa 366
>gnl|LJGI|DC596370 similar to UniRef100_A7QE15 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 542
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 196 ttcttccatgacccagatggctccatgattgaaatctgcaactgtga 242
|||||||||||||| ||||||| |||||||||| |||||||||||||
Sbjct: 452 ttcttccatgaccctgatggctacatgattgaactctgcaactgtga 498
>gnl|LJGI|TC71036 similar to UniRef100_A7QE15 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 765
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 196 ttcttccatgacccagatggctccatgattgaaatctgcaactgtga 242
|||||||||||||| ||||||| |||||||||| |||||||||||||
Sbjct: 304 ttcttccatgaccctgatggctacatgattgaactctgcaactgtga 350
>gnl|LJGI|TC67422 similar to UniRef100_A7QIS6 Cluster: Chromosome chr9 scaffold_104,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_104, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 902
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 199 ttccatgacccagatggctccatgattgaaatctgcaactgtgacagcatccc 251
||||||||||||||||| | ||||||||| || ||||| ||||| ||| ||||
Sbjct: 485 ttccatgacccagatggtttcatgattgagatatgcaattgtgatagcctccc 537