Miyakogusa Predicted Gene
- Lj4g3v1876850.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1876850.1 Non Chatacterized Hit- tr|K4C8J1|K4C8J1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,58.33,4e-17,CYTOPLASMIC DYNEIN LIGHT CHAIN,NULL; DYNEIN LIGHT
CHAIN,Dynein light chain, type 1/2; Dynein_light,D,gene.g55628.t1.1
(795 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS338862 similar to UniRef100_Q13BJ2 Cluster: Chaperone... 180 9e-45
gnl|LJGI|TC79520 172 2e-42
gnl|LJGI|TC76763 similar to UniRef100_Q9EMA1 Cluster: Envelope g... 165 5e-40
gnl|LJGI|FS350483 66 4e-10
>gnl|LJGI|FS338862 similar to UniRef100_Q13BJ2 Cluster: Chaperone DnaJ-like; n=1;
Rhodopseudomonas palustris BisB5|Rep: Chaperone
DnaJ-like - Rhodopseudomonas palustris (strain BisB5),
partial (6%)
Length = 226
Score = 180 bits (91), Expect = 9e-45
Identities = 106/111 (95%)
Strand = Plus / Minus
Query: 685 gggggtttcgctggtgatggtggtgttgggtgggagtgggatgagaagaaggaagaagaa 744
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 191 ggggggttcgctggtgatggtggtgttgggtgggagtgtgatgagaagaaggaagaagaa 132
Query: 745 gatgaagggaattattggtgcctgagttttgaagatgaagataatggttaa 795
||||||||||||||| |||||||| |||||||||||||||| |||||||||
Sbjct: 131 gatgaagggaattatgggtgcctgggttttgaagatgaagaaaatggttaa 81
>gnl|LJGI|TC79520
Length = 695
Score = 172 bits (87), Expect = 2e-42
Identities = 106/111 (95%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 685 gggggtttcgctggtgatggtggtgttgggtgggagtgggatgagaagaaggaagaagaa 744
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 228 ggggggttcgctggtgatggtggtgttaggtgggagtgggatgagaagaaggaagaagaa 169
Query: 745 gatgaagggaattattggtgcctgagttttgaagatgaagataatggttaa 795
|||||||||||||| ||||||||| |||||||||||||||| |||||||||
Sbjct: 168 gatgaagggaatta-tggtgcctgggttttgaagatgaagaaaatggttaa 119
>gnl|LJGI|TC76763 similar to UniRef100_Q9EMA1 Cluster: Envelope glycoprotein; n=1;
Human immunodeficiency virus 1|Rep: Envelope
glycoprotein - Human immunodeficiency virus 1, partial
(12%)
Length = 470
Score = 165 bits (83), Expect = 5e-40
Identities = 105/111 (94%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 685 gggggtttcgctggtgatggtggtgttgggtgggagtgggatgagaagaaggaagaagaa 744
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 287 ggggggttcgctggtgatggtggtgttaggtgggagtgggatgagaagaaggaagaagaa 228
Query: 745 gatgaagggaattattggtgcctgagttttgaagatgaagataatggttaa 795
|||||||||||||| ||||||||| |||||||||||||||| || ||||||
Sbjct: 227 gatgaagggaatta-tggtgcctgggttttgaagatgaagaaaagggttaa 178
>gnl|LJGI|FS350483
Length = 650
Score = 65.9 bits (33), Expect = 4e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 739 gaagaagatgaagggaattattggtgcctgagttttgaagatgaagataatggttaa 795
||||||||||||| ||||||| |||| ||| ||||| |||||||||| |||||||||
Sbjct: 604 gaagaagatgaagagaattatgggtgtctgggtttttaagatgaagaaaatggttaa 548