Miyakogusa Predicted Gene
- Lj4g3v1833610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1833610.1 Non Chatacterized Hit- tr|I3SJI8|I3SJI8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.45,0,FAMILY
NOT NAMED,NULL; Rab subfamily of small GTPases,Small GTPase
superfamily, Rab type; Ran (Ras-r,CUFF.49761.1
(393 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72255 homologue to UniRef100_Q6J9G2 Cluster: RAN; n=1... 779 0.0
gnl|LJGI|TC59399 UniRef100_Q8S2Z7 Cluster: GTP-binding protein; ... 234 3e-61
gnl|LJGI|TC78791 UniRef100_A7P7Q3 Cluster: Chromosome chr9 scaff... 230 5e-60
gnl|LJGI|TC57182 homologue to UniRef100_Q8S2Z7 Cluster: GTP-bind... 220 5e-57
>gnl|LJGI|TC72255 homologue to UniRef100_Q6J9G2 Cluster: RAN; n=1; Nicotiana
sylvestris|Rep: RAN - Nicotiana sylvestris (Wood
tobacco), complete
Length = 967
Score = 779 bits (393), Expect = 0.0
Identities = 393/393 (100%)
Strand = Plus / Plus
Query: 1 atgtttgatgtaacagcgaggttgacatacaagaatgttcctacttggcacagagatctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 atgtttgatgtaacagcgaggttgacatacaagaatgttcctacttggcacagagatctc 424
Query: 61 tgcagggtgtgtgagaacataccaattgttctatgtggaaacaaggttgatgtcaagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tgcagggtgtgtgagaacataccaattgttctatgtggaaacaaggttgatgtcaagaac 484
Query: 121 agacaggttaaagcaaaacaggtcacattccacaggaagaagaatctgcagtactatgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 agacaggttaaagcaaaacaggtcacattccacaggaagaagaatctgcagtactatgag 544
Query: 181 atctctgcaaagagtaactacaatttcgagaagcctttcttataccttgccaagaaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 atctctgcaaagagtaactacaatttcgagaagcctttcttataccttgccaagaaactt 604
Query: 241 gcaggggatcctggtcttcactttgtggagatgcctgctcttgctcccccagatgttgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gcaggggatcctggtcttcactttgtggagatgcctgctcttgctcccccagatgttgtc 664
Query: 301 cttgatctaacttcacagcaaatgaatgaacaagaacttcttattgcggcaaatcagcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 cttgatctaacttcacagcaaatgaatgaacaagaacttcttattgcggcaaatcagcct 724
Query: 361 cttcctgatgacgatgatgagatattttagaag 393
|||||||||||||||||||||||||||||||||
Sbjct: 725 cttcctgatgacgatgatgagatattttagaag 757
>gnl|LJGI|TC59399 UniRef100_Q8S2Z7 Cluster: GTP-binding protein; n=1; Helianthus
annuus|Rep: GTP-binding protein - Helianthus annuus
(Common sunflower), complete
Length = 992
Score = 234 bits (118), Expect = 3e-61
Identities = 202/230 (87%)
Strand = Plus / Plus
Query: 23 tgacatacaagaatgttcctacttggcacagagatctctgcagggtgtgtgagaacatac 82
|||||||||||||||| ||||| |||||| | ||||| ||| |||| || |||||||| |
Sbjct: 355 tgacatacaagaatgtccctacctggcaccgtgatctttgccgggtctgcgagaacatcc 414
Query: 83 caattgttctatgtggaaacaaggttgatgtcaagaacagacaggttaaagcaaaacagg 142
| |||||||| ||||| |||||||||||||| |||||||||||||| || ||||| ||||
Sbjct: 415 ccattgttctttgtggcaacaaggttgatgtgaagaacagacaggtgaaggcaaagcagg 474
Query: 143 tcacattccacaggaagaagaatctgcagtactatgagatctctgcaaagagtaactaca 202
| || |||||||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct: 475 ttactttccacaggaagaagaatctgcagtactatgagatctcagccaagagtaactata 534
Query: 203 atttcgagaagcctttcttataccttgccaagaaacttgcaggggatcct 252
| || |||||||||||| | || ||||||| |||||||||||| ||||||
Sbjct: 535 actttgagaagcctttcctttatcttgccaggaaacttgcaggtgatcct 584
>gnl|LJGI|TC78791 UniRef100_A7P7Q3 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape), partial (65%)
Length = 735
Score = 230 bits (116), Expect = 5e-60
Identities = 197/224 (87%)
Strand = Plus / Plus
Query: 23 tgacatacaagaatgttcctacttggcacagagatctctgcagggtgtgtgagaacatac 82
|||||||||||||||| ||||| |||||| | ||||| ||| |||| || |||||||| |
Sbjct: 388 tgacatacaagaatgtccctacctggcaccgtgatctttgccgggtctgcgagaacatcc 447
Query: 83 caattgttctatgtggaaacaaggttgatgtcaagaacagacaggttaaagcaaaacagg 142
| |||||||| ||||| |||||||||||||| |||||||||||||| || ||||| ||||
Sbjct: 448 ccattgttctttgtggcaacaaggttgatgtgaagaacagacaggtgaaggcaaagcagg 507
Query: 143 tcacattccacaggaagaagaatctgcagtactatgagatctctgcaaagagtaactaca 202
| || |||||||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct: 508 ttactttccacaggaagaagaatctgcagtactatgagatctcagccaagagtaactata 567
Query: 203 atttcgagaagcctttcttataccttgccaagaaacttgcaggg 246
| || |||||||||||| | || ||||||| |||||||||||||
Sbjct: 568 actttgagaagcctttcctttatcttgccaggaaacttgcaggg 611
>gnl|LJGI|TC57182 homologue to UniRef100_Q8S2Z7 Cluster: GTP-binding protein; n=1;
Helianthus annuus|Rep: GTP-binding protein - Helianthus
annuus (Common sunflower), complete
Length = 1131
Score = 220 bits (111), Expect = 5e-57
Identities = 216/251 (86%)
Strand = Plus / Plus
Query: 1 atgtttgatgtaacagcgaggttgacatacaagaatgttcctacttggcacagagatctc 60
||||||||||| || || || |||||||||||||||| ||||| |||||| | |||||
Sbjct: 305 atgtttgatgttactgcccggctgacatacaagaatgtccctacctggcaccgtgatctt 364
Query: 61 tgcagggtgtgtgagaacataccaattgttctatgtggaaacaaggttgatgtcaagaac 120
|||||||| ||||| ||||| ||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 365 tgcagggtctgtgaaaacatcccaattgttctctgtgggaacaaggttgatgtgaagaac 424
Query: 121 agacaggttaaagcaaaacaggtcacattccacaggaagaagaatctgcagtactatgag 180
|| ||||| || ||||| ||||| || ||||| |||||||||| ||||||||||||||
Sbjct: 425 aggcaggtcaaggcaaagcaggttactttccatcggaagaagaacttgcagtactatgag 484
Query: 181 atctctgcaaagagtaactacaatttcgagaagcctttcttataccttgccaagaaactt 240
||||| || ||||||||||| || || |||||||||||| | |||||||||| |||||||
Sbjct: 485 atctcagctaagagtaactataactttgagaagcctttcctgtaccttgccaggaaactt 544
Query: 241 gcaggggatcc 251
||||| |||||
Sbjct: 545 gcaggcgatcc 555