Miyakogusa Predicted Gene
- Lj4g3v1833600.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1833600.1 CUFF.49759.1
(243 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61884 weakly similar to UniRef100_A9U4N5 Cluster: Pre... 468 e-132
gnl|LJGI|DC598585 weakly similar to UniRef100_A9U4N5 Cluster: Pr... 420 e-117
gnl|LJGI|FS358678 homologue to UniRef100_Q0D788 Cluster: Os07g02... 74 4e-13
>gnl|LJGI|TC61884 weakly similar to UniRef100_A9U4N5 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(42%)
Length = 720
Score = 468 bits (236), Expect = e-132
Identities = 243/244 (99%), Gaps = 1/244 (0%)
Strand = Plus / Plus
Query: 1 atggcgccgccgtcagaatccttcgatcctttcaaccaagaacctgttgtgaggaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 atggcgccgccgtcagaatccttcgatcctttcaaccaagaacctgttgtgaggaagaag 159
Query: 61 aacaacggagccccaatcaagttccttcttcctctcatatatgcccctgttcttcctcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 aacaacggagccccaatcaagttccttcttcctctcatatatgcccctgttcttcctcta 219
Query: 121 attcgtatagcgttgcggcataaaccagttgtgagggatcgtttg-ttttttgctgtgtt 179
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 220 attcgtatagcgttgcggcataaaccagttgtgagggatcgtttgtttttttgctgtgtt 279
Query: 180 ggctggggcatttgctcatggttcctatctggtaacagatctgtatgatgctgagagcaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ggctggggcatttgctcatggttcctatctggtaacagatctgtatgatgctgagagcaa 339
Query: 240 gtga 243
||||
Sbjct: 340 gtga 343
>gnl|LJGI|DC598585 weakly similar to UniRef100_A9U4N5 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(64%)
Length = 552
Score = 420 bits (212), Expect = e-117
Identities = 212/212 (100%)
Strand = Plus / Plus
Query: 1 atggcgccgccgtcagaatccttcgatcctttcaaccaagaacctgttgtgaggaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 atggcgccgccgtcagaatccttcgatcctttcaaccaagaacctgttgtgaggaagaag 99
Query: 61 aacaacggagccccaatcaagttccttcttcctctcatatatgcccctgttcttcctcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 aacaacggagccccaatcaagttccttcttcctctcatatatgcccctgttcttcctcta 159
Query: 121 attcgtatagcgttgcggcataaaccagttgtgagggatcgtttgttttttgctgtgttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 attcgtatagcgttgcggcataaaccagttgtgagggatcgtttgttttttgctgtgttg 219
Query: 181 gctggggcatttgctcatggttcctatctggt 212
||||||||||||||||||||||||||||||||
Sbjct: 220 gctggggcatttgctcatggttcctatctggt 251
>gnl|LJGI|FS358678 homologue to UniRef100_Q0D788 Cluster: Os07g0278800 protein; n=1;
Oryza sativa Japonica Group|Rep: Os07g0278800 protein -
Oryza sativa subsp. japonica (Rice), partial (6%)
Length = 764
Score = 73.8 bits (37), Expect = 4e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 57 gaagaacaacggagccccaatcaagttccttcttcctctcatatatgcccctgttct 113
||||||||||| | |||| || ||| |||||||||||||||||||||||||||||||
Sbjct: 638 gaagaacaacgtaccccctattaaggtccttcttcctctcatatatgcccctgttct 582