Miyakogusa Predicted Gene
- Lj4g3v1813520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1813520.1 Non Chatacterized Hit- tr|I3T6H9|I3T6H9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,RING/U-box,NULL; The RING-variant domain is a C4HC3
zinc-fing,Zinc finger, RING-CH-type; no
descript,NODE_46722_length_892_cov_103.239914.path2.1
(759 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79183 similar to UniRef100_Q6YW60 Cluster: Zinc finge... 1505 0.0
>gnl|LJGI|TC79183 similar to UniRef100_Q6YW60 Cluster: Zinc finger (C3HC4-type RING
finger) protein-like; n=1; Oryza sativa Japonica
Group|Rep: Zinc finger (C3HC4-type RING finger)
protein-like - Oryza sativa subsp. japonica (Rice),
partial (82%)
Length = 1359
Score = 1505 bits (759), Expect = 0.0
Identities = 759/759 (100%)
Strand = Plus / Plus
Query: 1 atgaaaggggaagtgcaactccaacctcctccgattatgcaaaaccctagtgattccgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atgaaaggggaagtgcaactccaacctcctccgattatgcaaaaccctagtgattccgac 239
Query: 61 cctttactccttgaccatgatgaggatgagtcccctttgagctctgctgagattaaggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cctttactccttgaccatgatgaggatgagtcccctttgagctctgctgagattaaggat 299
Query: 121 gaggaggatgttgaggctggttcactcccttgttgtcgaatttgcctcgaaagcgattcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gaggaggatgttgaggctggttcactcccttgttgtcgaatttgcctcgaaagcgattcc 359
Query: 181 gacccagaagatgaattgatatctccatgcatgtgcaaagggacccagcagttcgtccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gacccagaagatgaattgatatctccatgcatgtgcaaagggacccagcagttcgtccat 419
Query: 241 cgttcatgtcttgatcactggcgctcagttaaggaaggatttgccttctcacactgtacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cgttcatgtcttgatcactggcgctcagttaaggaaggatttgccttctcacactgtacc 479
Query: 301 acctgcaaggcccaatttcatcttagagttgaatcgtatgaggacaactcttggcgtaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 acctgcaaggcccaatttcatcttagagttgaatcgtatgaggacaactcttggcgtaaa 539
Query: 361 ataaagttcagactttttgtggcaagggatgttttccttgtttttgttgctgtacaaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ataaagttcagactttttgtggcaagggatgttttccttgtttttgttgctgtacaaact 599
Query: 421 gtgattgctgctattggtggctttgcctacatcatggacaaagatgggaccttcagaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gtgattgctgctattggtggctttgcctacatcatggacaaagatgggaccttcagaaac 659
Query: 481 tcatttgatgatggttgggataggatactgtcaaagcatcctataccattttattattgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tcatttgatgatggttgggataggatactgtcaaagcatcctataccattttattattgt 719
Query: 541 ataggagtgctggccttctttgtactgattggattttttggtctcatactgcactgctcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ataggagtgctggccttctttgtactgattggattttttggtctcatactgcactgctcc 779
Query: 601 tcactcaattccaatgatcccagaatggctggctgtcagaactgttgttatggatggggc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tcactcaattccaatgatcccagaatggctggctgtcagaactgttgttatggatggggc 839
Query: 661 atcctggattgctttcctgcatcagtggaagcgtgcttcgctctcgtggttgtttttgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 atcctggattgctttcctgcatcagtggaagcgtgcttcgctctcgtggttgtttttgtt 899
Query: 721 gtcatctttgcaattcttggtatagcttacggttttctt 759
|||||||||||||||||||||||||||||||||||||||
Sbjct: 900 gtcatctttgcaattcttggtatagcttacggttttctt 938