Miyakogusa Predicted Gene

Lj4g3v1800250.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1800250.1 Non Chatacterized Hit- tr|I1MUE5|I1MUE5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26979
PE,93.89,0,ATP-BINDING CASSETTE TRANSPORTER (PDR),NULL; ATP-BINDING
CASSETTE TRANSPORTER,NULL; P-loop containin,CUFF.49739.1
         (1929 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW623406 similar to UniRef100_A7P745 Cluster: Chromosom...    60   5e-08

>gnl|LJGI|BW623406 similar to UniRef100_A7P745 Cluster: Chromosome chr9 scaffold_7,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr9 scaffold_7, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (27%)
          Length = 461

 Score = 60.0 bits (30), Expect = 5e-08
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1553 atactgggcgaacaattgtgtgcacgatccatcagcctagcatagacatatttgaatcct 1612
            |||||||  ||||| |||| |||||||| || ||||||||||| || || |||||| |||
Sbjct: 83   atactggaagaacagttgtttgcacgattcaccagcctagcattgatatctttgaagcct 142

                      
Query: 1613 ttgatgagct 1622
            ||||||||||
Sbjct: 143  ttgatgagct 152