Miyakogusa Predicted Gene

Lj4g3v1788170.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1788170.1 Non Chatacterized Hit- tr|I1K1B1|I1K1B1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32507
PE,90.44,0,coiled-coil,NULL; seg,NULL; DnaJ molecular chaperone
homology domain,Heat shock protein DnaJ, N-term,CUFF.49746.1
         (5301 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79964 homologue to UniRef100_A7PEV3 Cluster: Chromoso...  1217   0.0  
gnl|LJGI|TC75778                                                       56   2e-06

>gnl|LJGI|TC79964 homologue to UniRef100_A7PEV3 Cluster: Chromosome chr11 scaffold_13,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr11 scaffold_13, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (7%)
          Length = 614

 Score = 1217 bits (614), Expect = 0.0
 Identities = 614/614 (100%)
 Strand = Plus / Plus

                                                                        
Query: 4633 gctgttgaccctgagcttcctttgcttctgtcagctgcgcttgttttattactacgcgtg 4692
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gctgttgaccctgagcttcctttgcttctgtcagctgcgcttgttttattactacgcgtg 60

                                                                        
Query: 4693 caccctgcactagcagatcatgttgggtatcttggatatgtaccgaaactagtttctgct 4752
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   caccctgcactagcagatcatgttgggtatcttggatatgtaccgaaactagtttctgct 120

                                                                        
Query: 4753 gttgcatttgagggaaggcgagaaacaatgtcatcagctgaggtaaatgacgggaagcat 4812
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gttgcatttgagggaaggcgagaaacaatgtcatcagctgaggtaaatgacgggaagcat 180

                                                                        
Query: 4813 gcagacaaaacatatggcccagataatgaatcagcagagaacacacaaactcctcaagag 4872
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gcagacaaaacatatggcccagataatgaatcagcagagaacacacaaactcctcaagag 240

                                                                        
Query: 4873 cgtgtgcgcctgagttgtttgcgcgtcttgcatcaactggcaggtagtaccacgtgtgct 4932
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  cgtgtgcgcctgagttgtttgcgcgtcttgcatcaactggcaggtagtaccacgtgtgct 300

                                                                        
Query: 4933 gaagccatggcagcaaccagtgttggaacacctcaggttgttccagtgctaatgaaagct 4992
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  gaagccatggcagcaaccagtgttggaacacctcaggttgttccagtgctaatgaaagct 360

                                                                        
Query: 4993 atagggtggcaaggcggaagcattttagctcttgagaccctaaaacgacttgtggttgct 5052
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  atagggtggcaaggcggaagcattttagctcttgagaccctaaaacgacttgtggttgct 420

                                                                        
Query: 5053 ggaaaccgagctagggatgctcttgttgctcaaggacttaaagttggtcttgttgaagta 5112
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  ggaaaccgagctagggatgctcttgttgctcaaggacttaaagttggtcttgttgaagta 480

                                                                        
Query: 5113 cttcttggtcttcttgattggagagccgggggcaggaatggattttgttcccagatgaag 5172
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  cttcttggtcttcttgattggagagccgggggcaggaatggattttgttcccagatgaag 540

                                                                        
Query: 5173 tggaatgaatctgaagcatcaattggcagggtgctggcaattgaggtcttgcatgccttt 5232
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  tggaatgaatctgaagcatcaattggcagggtgctggcaattgaggtcttgcatgccttt 600

                          
Query: 5233 gccactgaaggggc 5246
            ||||||||||||||
Sbjct: 601  gccactgaaggggc 614


>gnl|LJGI|TC75778 
          Length = 518

 Score = 56.0 bits (28), Expect = 2e-06
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                        
Query: 5274 gaataattctgatgtttggagtgcgtac 5301
            ||||||||||||||||||||||||||||
Sbjct: 2    gaataattctgatgtttggagtgcgtac 29