Miyakogusa Predicted Gene
- Lj4g3v1787060.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1787060.1 Non Chatacterized Hit- tr|H9VGN9|H9VGN9_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=U,64.1,2e-16,seg,NULL; RING/U-box,NULL; Tmemb_185A,Transmembrane
Fragile-X-F-associated protein; zf-C3HC4_3,NULL;,CUFF.49721.1
(1398 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67971 similar to UniRef100_A7PGP0 Cluster: Chromosome... 1380 0.0
gnl|LJGI|TC64373 homologue to UniRef100_A7PGP0 Cluster: Chromoso... 773 0.0
gnl|LJGI|TC57718 similar to UniRef100_A7PGP0 Cluster: Chromosome... 159 6e-38
>gnl|LJGI|TC67971 similar to UniRef100_A7PGP0 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 952
Score = 1380 bits (696), Expect = 0.0
Identities = 696/696 (100%)
Strand = Plus / Plus
Query: 1 atgagctggcgaagggtgttgaagtcagtgcaggcactcgctgcacacacttttctcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 atgagctggcgaagggtgttgaagtcagtgcaggcactcgctgcacacacttttctcttc 316
Query: 61 tgcttcactctcttgctccttctcaagctcgatcatcaactctcttcctcttggtggaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tgcttcactctcttgctccttctcaagctcgatcatcaactctcttcctcttggtggaca 376
Query: 121 atattttcacctctttggatgttccatgccgttgtcgctcgaggaaggttttcattacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atattttcacctctttggatgttccatgccgttgtcgctcgaggaaggttttcattacct 436
Query: 181 gcaccatcagctccacgtaatcgacattgggcaccatgccatacggtcgtcgcaacccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gcaccatcagctccacgtaatcgacattgggcaccatgccatacggtcgtcgcaacccca 496
Query: 241 ttgcttattgcatttgaattgctcctttgtatatatcttgagagcttatatgttcgtggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttgcttattgcatttgaattgctcctttgtatatatcttgagagcttatatgttcgtggc 556
Query: 301 tttgcagcagtcaatctgaagattgtgttccttcccttactaacatttgaaatcattatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tttgcagcagtcaatctgaagattgtgttccttcccttactaacatttgaaatcattatt 616
Query: 361 ctcattgacaatttcagaatgtgtagggctctaatgccaggggatgaagatagcatgagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ctcattgacaatttcagaatgtgtagggctctaatgccaggggatgaagatagcatgagt 676
Query: 421 gatgaagcaatctgggaaactcttcctcacttttggattgcaatctctatggtgttcttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gatgaagcaatctgggaaactcttcctcacttttggattgcaatctctatggtgttcttc 736
Query: 481 attgctgccacaatcttcaccctcttaaaactgagtggtgacgtaggtgctctaggctgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 attgctgccacaatcttcaccctcttaaaactgagtggtgacgtaggtgctctaggctgg 796
Query: 541 tgggacttatttattaactttgctattgccgagtgctttgcttttcttgtatgtacaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 tgggacttatttattaactttgctattgccgagtgctttgcttttcttgtatgtacaaag 856
Query: 601 tggtccaatccggtcattcatagaaattccagagaagccagttcatcttctactgcaatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 tggtccaatccggtcattcatagaaattccagagaagccagttcatcttctactgcaatt 916
Query: 661 agatatcttgactggaacagtggtttaacactttct 696
||||||||||||||||||||||||||||||||||||
Sbjct: 917 agatatcttgactggaacagtggtttaacactttct 952
>gnl|LJGI|TC64373 homologue to UniRef100_A7PGP0 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 650
Score = 773 bits (390), Expect = 0.0
Identities = 390/390 (100%)
Strand = Plus / Plus
Query: 1009 agattattaggttggtggtcaattgatgaagggagtcgggaagaacaggcacgattgtac 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agattattaggttggtggtcaattgatgaagggagtcgggaagaacaggcacgattgtac 60
Query: 1069 catgagggagcatcggggtataatactttctgtggttatcctcctgagattgttaagaaa 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catgagggagcatcggggtataatactttctgtggttatcctcctgagattgttaagaaa 120
Query: 1129 atgcctaaaaaggatctcgctgaggaggtgtggagactccaggcagctcttggtgagcag 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgcctaaaaaggatctcgctgaggaggtgtggagactccaggcagctcttggtgagcag 180
Query: 1189 acggaaattataaaatacagccaacaggagtatgaaagacttaaaaatgagaaagtgtta 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acggaaattataaaatacagccaacaggagtatgaaagacttaaaaatgagaaagtgtta 240
Query: 1249 tgcagaatttgttttgagggagagattagtgttgtattgctcccatgtaggcatcgtgtc 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcagaatttgttttgagggagagattagtgttgtattgctcccatgtaggcatcgtgtc 300
Query: 1309 ctttgcagcacttgctcagagaagtgtaagaagtgtccaatttgccgtgactctatagca 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctttgcagcacttgctcagagaagtgtaagaagtgtccaatttgccgtgactctatagca 360
Query: 1369 gagcgcttgcccgtatatgatgtctaggcg 1398
||||||||||||||||||||||||||||||
Sbjct: 361 gagcgcttgcccgtatatgatgtctaggcg 390
>gnl|LJGI|TC57718 similar to UniRef100_A7PGP0 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 819
Score = 159 bits (80), Expect = 6e-38
Identities = 155/180 (86%)
Strand = Plus / Plus
Query: 424 gaagcaatctgggaaactcttcctcacttttggattgcaatctctatggtgttcttcatt 483
|||||| | |||||||||||||||||||| |||||| |||| || ||||| ||||| |||
Sbjct: 612 gaagcagtatgggaaactcttcctcacttctggatttcaatatccatggtcttctttatt 671
Query: 484 gctgccacaatcttcaccctcttaaaactgagtggtgacgtaggtgctctaggctggtgg 543
||||||||| | ||||||||| |||| | ||||||| || | ||||||||||||||||
Sbjct: 672 gctgccacagtgttcaccctcctaaagatatgtggtgatgttgctgctctaggctggtgg 731
Query: 544 gacttatttattaactttgctattgccgagtgctttgcttttcttgtatgtacaaagtgg 603
||||||||||||||||||| ||||| |||||||||| |||||||| ||||| ||||||
Sbjct: 732 gacttatttattaactttggcattgcacagtgctttgcgtttcttgtttgtacgaagtgg 791