Miyakogusa Predicted Gene

Lj4g3v1736110.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1736110.1 Non Chatacterized Hit- tr|I1MT91|I1MT91_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,74.8,0,no
description,Transcription factor, MADS-box; MADS BOX PROTEIN,NULL;
MADSDOMAIN,Transcription facto,CUFF.49658.1
         (747 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79486 similar to UniRef100_Q39401 Cluster: MADS5 prot...   656   0.0  
gnl|LJGI|TC75219 similar to UniRef100_Q56NI4 Cluster: MADS box p...    60   2e-08

>gnl|LJGI|TC79486 similar to UniRef100_Q39401 Cluster: MADS5 protein; n=1; Betula
           pendula|Rep: MADS5 protein - Betula verrucosa (White
           birch) (Betula pendula), partial (26%)
          Length = 581

 Score =  656 bits (331), Expect = 0.0
 Identities = 345/352 (98%)
 Strand = Plus / Plus

                                                                       
Query: 396 acttgattccgctctcaaacacattagatcacgaaagaaccaagccttgtttgaatctat 455
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   acttgattccgctctcaaacacattagatcacgaaagaaccaagccttgtttgaatctat 60

                                                                       
Query: 456 ttcagagcttcnnnnnnnggataaggcacttcaggaacaaaacaacttgctgaccaagaa 515
           |||||||||||       ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttcagagcttcaaaaaaaggataaggcacttcaggaacaaaacaacttgctgaccaagaa 120

                                                                       
Query: 516 gataaaggaaaaagagaaggccatcaccacccaagaggagcaagaggggcttcaaaatag 575
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gataaaggaaaaagagaaggccatcaccacccaagaggagcaagaggggcttcaaaatag 180

                                                                       
Query: 576 tgcaaatgttgcctctggcctagtaactcaaccattggagtccatgaacattggaggctc 635
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcaaatgttgcctctggcctagtaactcaaccattggagtccatgaacattggaggctc 240

                                                                       
Query: 636 cccagaagccagatgtgatgaaagaactccaactcctactcctactccaactcgagctaa 695
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cccagaagccagatgtgatgaaagaactccaactcctactcctactccaactcgagctaa 300

                                                               
Query: 696 caccattaatcttcccccttggatgcttcgtcctacaaatgatcaatagaag 747
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caccattaatcttcccccttggatgcttcgtcctacaaatgatcaatagaag 352


>gnl|LJGI|TC75219 similar to UniRef100_Q56NI4 Cluster: MADS box protein M6; n=1;
           Pisum sativum|Rep: MADS box protein M6 - Pisum sativum
           (Garden pea), complete
          Length = 1276

 Score = 60.0 bits (30), Expect = 2e-08
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                       
Query: 10  ggaagagtgcagttgaagaggatcgagaacaagatcaacagacaggtaacattttcaaag 69
           ||||||||| || |||||||||| ||||||||||| ||||| || || |||||| |||||
Sbjct: 319 ggaagagtggagctgaagaggatagagaacaagataaacaggcaagttacatttgcaaag 378

             
Query: 70  ag 71
           ||
Sbjct: 379 ag 380