Miyakogusa Predicted Gene
- Lj4g3v1736080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1736080.1 Non Chatacterized Hit- tr|C6T742|C6T742_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2 S,81.56,0,MADS
BOX PROTEIN,NULL; MADS_BOX_2,Transcription factor, MADS-box;
K_BOX,Transcription factor, K-box;,gene.g55506.t1.1
(732 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75219 similar to UniRef100_Q56NI4 Cluster: MADS box p... 167 1e-40
gnl|LJGI|GO024192 similar to UniRef100_Q8LLR1 Cluster: MADS-box ... 125 4e-28
gnl|LJGI|TC71124 similar to UniRef100_A1XG54 Cluster: SOC1; n=1;... 86 4e-16
gnl|LJGI|TC68434 UniRef100_Q533S6 Cluster: MADS box protein SEP3... 74 1e-12
gnl|LJGI|TC76874 UniRef100_Q533S8 Cluster: MADS box protein AP1a... 72 5e-12
gnl|LJGI|FS335696 similar to UniRef100_Q67BK3 Cluster: AGL15; n=... 70 2e-11
gnl|LJGI|TC65119 homologue to UniRef100_Q533R9 Cluster: MADS box... 68 8e-11
gnl|LJGI|TC57459 UniRef100_Q533R8 Cluster: MADS box protein AGL1... 68 8e-11
gnl|LJGI|TC66956 UniRef100_Q533S2 Cluster: MADS box protein AP3-... 66 3e-10
gnl|LJGI|GO037100 homologue to UniRef100_A0EIX6 Cluster: Transcr... 64 1e-09
gnl|LJGI|TC75220 homologue to UniRef100_A1XG54 Cluster: SOC1; n=... 62 5e-09
>gnl|LJGI|TC75219 similar to UniRef100_Q56NI4 Cluster: MADS box protein M6; n=1;
Pisum sativum|Rep: MADS box protein M6 - Pisum sativum
(Garden pea), complete
Length = 1276
Score = 167 bits (84), Expect = 1e-40
Identities = 189/224 (84%)
Strand = Plus / Plus
Query: 1 atgggaagagggaaagttgaactgaagaggatagagaacaaaattaacaggcaagtgact 60
||||| ||||| | ||| || |||||||||||||||||||| || ||||||||||| ||
Sbjct: 310 atggggagaggaagagtggagctgaagaggatagagaacaagataaacaggcaagttaca 369
Query: 61 tttgccaagagaagaaatgggatactcaagaaggcttatgagctctctgttctctgtgat 120
||||| ||||| ||||||||| | |||||||| ||||||||||| |||||||||||||||
Sbjct: 370 tttgcaaagaggagaaatgggcttctcaagaaagcttatgagctttctgttctctgtgat 429
Query: 121 gctgaggttgctctcatcatcttctccaaccgtgggaagctctatgagttcagcagcacc 180
|||||||||||||| || ||||||||| ||||| ||||| |||||||| | |||| |
Sbjct: 430 gctgaggttgctcttattgtcttctccactcgtggcaagctttatgagttttgtagcagc 489
Query: 181 tccagcataatgaaaacactggaaaaataccagaagtacagtta 224
|| ||||| | || ||||| |||| |||||||||| ||||||
Sbjct: 490 tctagcatggtcaagacacttgaaaggtaccagaagtgcagtta 533
>gnl|LJGI|GO024192 similar to UniRef100_Q8LLR1 Cluster: MADS-box protein 3; n=1; Vitis
vinifera|Rep: MADS-box protein 3 - Vitis vinifera
(Grape), partial (53%)
Length = 482
Score = 125 bits (63), Expect = 4e-28
Identities = 141/167 (84%)
Strand = Plus / Plus
Query: 1 atgggaagagggaaagttgaactgaagaggatagagaacaaaattaacaggcaagtgact 60
||||| ||||| | |||||| ||||||||||||||||||||||| ||| | || || |||
Sbjct: 95 atgggtagaggtagagttgagctgaagaggatagagaacaaaatcaaccgccaggttact 154
Query: 61 tttgccaagagaagaaatgggatactcaagaaggcttatgagctctctgttctctgtgat 120
|| |||| || || ||||| | |||||||| || | ||||||||| |||| ||||||
Sbjct: 155 ttctccaaaaggaggaatggtttgctcaagaaagcatgtgagctctcaattctgtgtgat 214
Query: 121 gctgaggttgctctcatcatcttctccaaccgtgggaagctctatga 167
|||||||||||||||||||| ||||| | ||||||||||||||||||
Sbjct: 215 gctgaggttgctctcatcattttctcaagccgtgggaagctctatga 261
>gnl|LJGI|TC71124 similar to UniRef100_A1XG54 Cluster: SOC1; n=1; Glycine max|Rep:
SOC1 - Glycine max (Soybean), partial (71%)
Length = 1108
Score = 85.7 bits (43), Expect = 4e-16
Identities = 91/107 (85%)
Strand = Plus / Plus
Query: 65 ccaagagaagaaatgggatactcaagaaggcttatgagctctctgttctctgtgatgctg 124
|||||||||||||||| | || |||||||||| ||||||||| || || ||||||||||
Sbjct: 282 ccaagagaagaaatggactccttaagaaggcttttgagctctcagtgctgtgtgatgctg 341
Query: 125 aggttgctctcatcatcttctccaaccgtgggaagctctatgagttc 171
| || || |||||||||||||| | | ||||||||||||||||||
Sbjct: 342 aagtcgcactcatcatcttctctaccacagggaagctctatgagttc 388
>gnl|LJGI|TC68434 UniRef100_Q533S6 Cluster: MADS box protein SEP3; n=1; Lotus
japonicus|Rep: MADS box protein SEP3 - Lotus japonicus,
complete
Length = 1153
Score = 73.8 bits (37), Expect = 1e-12
Identities = 121/149 (81%)
Strand = Plus / Plus
Query: 1 atgggaagagggaaagttgaactgaagaggatagagaacaaaattaacaggcaagtgact 60
||||| ||||| | ||| || |||||||| || |||||||| || ||||||||||||||
Sbjct: 46 atggggagaggaagagtggagctgaagagaattgagaacaagatcaacaggcaagtgacc 105
Query: 61 tttgccaagagaagaaatgggatactcaagaaggcttatgagctctctgttctctgtgat 120
|| || || | || || || || | ||||| |||||||| || || ||||| || |||
Sbjct: 106 ttcgctaaacgcaggaacggactattgaagaaagcttatgaactttccgttctttgcgat 165
Query: 121 gctgaggttgctctcatcatcttctccaa 149
|| ||||||||||||||||||||||||||
Sbjct: 166 gcggaggttgctctcatcatcttctccaa 194
>gnl|LJGI|TC76874 UniRef100_Q533S8 Cluster: MADS box protein AP1a; n=1; Lotus
japonicus|Rep: MADS box protein AP1a - Lotus japonicus,
complete
Length = 1382
Score = 71.9 bits (36), Expect = 5e-12
Identities = 105/128 (82%)
Strand = Plus / Plus
Query: 1 atgggaagagggaaagttgaactgaagaggatagagaacaaaattaacaggcaagtgact 60
|||||||| || | |||| | |||||||||||||||||||| || || |||| || |||
Sbjct: 291 atgggaaggggtagagttcagctgaagaggatagagaacaagatcaatcggcaggtaact 350
Query: 61 tttgccaagagaagaaatgggatactcaagaaggcttatgagctctctgttctctgtgat 120
|| |||| || ||| |||| | |||||||| ||| ||||| ||||||||||||| |||
Sbjct: 351 ttctccaaaaggagagctgggcttctcaagaaagctcatgagatctctgttctctgcgat 410
Query: 121 gctgaggt 128
||||||||
Sbjct: 411 gctgaggt 418
>gnl|LJGI|FS335696 similar to UniRef100_Q67BK3 Cluster: AGL15; n=1; Glycine max|Rep:
AGL15 - Glycine max (Soybean), partial (66%)
Length = 772
Score = 69.9 bits (35), Expect = 2e-11
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 48 caggcaagtgacttttgccaagagaagaaatgggatactcaagaaggcttatgagctctc 107
||||||||| || || ||||||| |||| |||| | ||||||||||| | ||||| |
Sbjct: 310 caggcaagtcacattctccaagaggagaactgggttgctcaagaaggcaaaggagctagc 369
Query: 108 tgttctctgtgatgctgaggttgctctcatcatcttctccaac 150
||||||||||||||||||||||| | |||||||||||||||
Sbjct: 370 cattctctgtgatgctgaggttgctgttatcatcttctccaac 412
>gnl|LJGI|TC65119 homologue to UniRef100_Q533R9 Cluster: MADS box protein AGL1; n=1;
Lotus japonicus|Rep: MADS box protein AGL1 - Lotus
japonicus, complete
Length = 1053
Score = 67.9 bits (34), Expect = 8e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 94 gcttatgagctctctgttctctgtgatgctgaggttgctctcatcatcttctccaaccgt 153
||||||||||| |||||||| ||||||||||| ||||||||||| ||||||| | ||||
Sbjct: 186 gcttatgagctatctgttctgtgtgatgctgaagttgctctcattgtcttctcaagccgt 245
Query: 154 gg 155
||
Sbjct: 246 gg 247
>gnl|LJGI|TC57459 UniRef100_Q533R8 Cluster: MADS box protein AGL11; n=1; Lotus
japonicus|Rep: MADS box protein AGL11 - Lotus japonicus,
complete
Length = 983
Score = 67.9 bits (34), Expect = 8e-11
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 66 caagagaagaaatgggatactcaagaaggcttatgagctctctgttctctgtgatgctga 125
|||||||||||| ||| | || ||||| ||||||||||| || || || |||||||||||
Sbjct: 149 caagagaagaaacgggcttctgaagaaagcttatgagctatcagtgctgtgtgatgctga 208
Query: 126 ggttgctctcatcatcttctccaaccgtgg 155
||||| ||||| ||||||||| ||||||
Sbjct: 209 agttgccctcattgtcttctccagccgtgg 238
>gnl|LJGI|TC66956 UniRef100_Q533S2 Cluster: MADS box protein AP3-like; n=1; Lotus
japonicus|Rep: MADS box protein AP3-like - Lotus
japonicus, complete
Length = 1105
Score = 65.9 bits (33), Expect = 3e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 65 ccaagagaagaaatgggatactcaagaaggcttatgagctctctgttctctgtgatgctg 124
||||| |||||||||| || ||||||| ||| |||| ||| ||||||||||||||||
Sbjct: 201 ccaagcgaagaaatggtatcttcaagaaagctcatgaactcagtgttctctgtgatgcta 260
Query: 125 aggttgctctcatcatcttctccaa 149
||||| | |||||||| ||||||||
Sbjct: 261 aggtttccctcatcatgttctccaa 285
>gnl|LJGI|GO037100 homologue to UniRef100_A0EIX6 Cluster: Transcription factor AGL20;
n=1; Ipomoea batatas|Rep: Transcription factor AGL20 -
Ipomoea batatas (Sweet potato) (Batate), partial (33%)
Length = 371
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 67 aagagaagaaatgggatactcaagaaggcttatgagctctctgttctctgtgatgctgag 126
|||||| |||||||| | ||||||||||| | |||||| || ||||| ||||||||||||
Sbjct: 213 aagagacgaaatgggttgctcaagaaggcatttgagctttcagttctgtgtgatgctgag 272
Query: 127 gttgctct 134
|| |||||
Sbjct: 273 gtggctct 280
>gnl|LJGI|TC75220 homologue to UniRef100_A1XG54 Cluster: SOC1; n=1; Glycine max|Rep:
SOC1 - Glycine max (Soybean), partial (35%)
Length = 555
Score = 61.9 bits (31), Expect = 5e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 88 aagaaggcttatgagctctctgttctctgtgatgctgaggttgctctcatcatcttctc 146
|||||||| | |||||| ||||| || ||||| |||||||| |||||||||||||||||
Sbjct: 419 aagaaggcctttgagctttctgtgctttgtgaggctgaggtagctctcatcatcttctc 477