Miyakogusa Predicted Gene
- Lj4g3v1725040.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1725040.1 Non Chatacterized Hit- tr|I1MT88|I1MT88_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18837 PE,66.85,0,SBT
domain,Transcription factor, SBP-box; SBP,Transcription factor,
SBP-box; ZF_SBP,Transcription fa,CUFF.49653.1
(1617 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV417559 829 0.0
gnl|LJGI|AV766997 similar to UniRef100_Q94JW8 Cluster: Squamosa ... 438 e-122
gnl|LJGI|TC70719 similar to UniRef100_A8II32 Cluster: Predicted ... 58 2e-07
>gnl|LJGI|AV417559
Length = 420
Score = 829 bits (418), Expect = 0.0
Identities = 418/418 (100%)
Strand = Plus / Plus
Query: 919 ggacatcctatgtcaagatctctatttccttcacacaaccaaaaacaatttccctttctt 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ggacatcctatgtcaagatctctatttccttcacacaaccaaaaacaatttccctttctt 62
Query: 979 catcatgaaaatggtgccgcgtccactaccgaaagcatcttctgtgatagcaatggccaa 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 catcatgaaaatggtgccgcgtccactaccgaaagcatcttctgtgatagcaatggccaa 122
Query: 1039 tatccaccttccctcggggctgcccaaaattctggtttacgaccactattccacgacacc 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tatccaccttccctcggggctgcccaaaattctggtttacgaccactattccacgacacc 182
Query: 1099 tccttaggaagtgaggacttcaatgttttctacacaccatcaactgttcagggattatcg 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tccttaggaagtgaggacttcaatgttttctacacaccatcaactgttcagggattatcg 242
Query: 1159 ggaatttcagactcttgtgctctctctcttctgtcatcacaatcccagaactcgccaagc 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ggaatttcagactcttgtgctctctctcttctgtcatcacaatcccagaactcgccaagc 302
Query: 1219 caatcgtcaggaattcctttggctcacccctttgttattcccagcagccatagccatcac 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 caatcgtcaggaattcctttggctcacccctttgttattcccagcagccatagccatcac 362
Query: 1279 tacagcatgagtcaggtctcggaaaagataggaataagctcacacacttcttcaagcc 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tacagcatgagtcaggtctcggaaaagataggaataagctcacacacttcttcaagcc 420
>gnl|LJGI|AV766997 similar to UniRef100_Q94JW8 Cluster: Squamosa promoter-binding-like
protein 6; n=1; Arabidopsis thaliana|Rep: Squamosa
promoter-binding-like protein 6 - Arabidopsis thaliana
(Mouse-ear cress), partial (4%)
Length = 517
Score = 438 bits (221), Expect = e-122
Identities = 221/221 (100%)
Strand = Plus / Minus
Query: 1397 cattgatatcagacaatcatgatattgtccactttggaatggcagatgggattttccaac 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 cattgatatcagacaatcatgatattgtccactttggaatggcagatgggattttccaac 458
Query: 1457 aatcagattttgtgagcgtgaaagatcgtctttcctgtgaagatgatgcgaccattgact 1516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 aatcagattttgtgagcgtgaaagatcgtctttcctgtgaagatgatgcgaccattgact 398
Query: 1517 tgctccaactgtcatcacagcttcagcgagtggagcatcagcggcaatccttgcagctaa 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tgctccaactgtcatcacagcttcagcgagtggagcatcagcggcaatccttgcagctaa 338
Query: 1577 agcaagagaatgattctccgtgcactctccggattacttaa 1617
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agcaagagaatgattctccgtgcactctccggattacttaa 297
>gnl|LJGI|TC70719 similar to UniRef100_A8II32 Cluster: Predicted protein; n=1;
Chlamydomonas reinhardtii|Rep: Predicted protein -
Chlamydomonas reinhardtii, partial (8%)
Length = 534
Score = 58.0 bits (29), Expect = 2e-07
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1170 ctcttgtgctctctctcttctgtcatcac 1198
|||||||||||||||||||||||||||||
Sbjct: 150 ctcttgtgctctctctcttctgtcatcac 178