Miyakogusa Predicted Gene

Lj4g3v1720850.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1720850.1 Non Chatacterized Hit- tr|I1MT77|I1MT77_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20720 PE,78.12,0,NUCLEAR
TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN / RNA RECOGNITION MOTIF
(RRM)-CONTAINING PROTEIN,NU,CUFF.49649.1
         (1206 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58446 similar to UniRef100_UPI00001628EF Cluster: nuc...   954   0.0  
gnl|LJGI|TC59672 similar to UniRef100_A7QI03 Cluster: Chromosome...   755   0.0  

>gnl|LJGI|TC58446 similar to UniRef100_UPI00001628EF Cluster: nuclear transport
           factor 2 (NTF2) family protein / RNA recognition motif
           (RRM)-containing protein; n=1; Arabidopsis thaliana|Rep:
           nuclear transport factor 2 (NTF2) family protein / RNA
           recognition motif (RRM)-containing protein - Arabidopsis
           thaliana, partial (26%)
          Length = 808

 Score =  954 bits (481), Expect = 0.0
 Identities = 481/481 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacaacggtgacaactacgaaagcaatcaatgagaatattatttccctgaattatgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atgacaacggtgacaactacgaaagcaatcaatgagaatattatttccctgaattatgaa 387

                                                                       
Query: 61  gattatacagcagaaattaaaaccgcagatgctcaggagtcgtatgagaaaggtgtgatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gattatacagcagaaattaaaaccgcagatgctcaggagtcgtatgagaaaggtgtgatt 447

                                                                       
Query: 121 gttttagtaactggatgcttaactgggaaggataatgtgggacggaagttctcgcagacg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gttttagtaactggatgcttaactgggaaggataatgtgggacggaagttctcgcagacg 507

                                                                       
Query: 181 ttcttccttgccccacaagataaaggatattatgtcttaaatgacgtgttcaggtatatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ttcttccttgccccacaagataaaggatattatgtcttaaatgacgtgttcaggtatatt 567

                                                                       
Query: 241 gaggataatgacacaccacaattaaattctgtcccagtaaatatcatcaatgaaaatgtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gaggataatgacacaccacaattaaattctgtcccagtaaatatcatcaatgaaaatgtt 627

                                                                       
Query: 301 gaggcacacataccagaatcagaggatatacatgctccaaaacatcttgtggaagatcct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gaggcacacataccagaatcagaggatatacatgctccaaaacatcttgtggaagatcct 687

                                                                       
Query: 361 acaacttctactgaggatgaaaaccttaatgatggtaatgaagttcatcatcctcaggac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 acaacttctactgaggatgaaaaccttaatgatggtaatgaagttcatcatcctcaggac 747

                                                                       
Query: 421 aacgaggaagaaggatccgttattgatgaagaggttgctgtaacctctgctgatataagt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 aacgaggaagaaggatccgttattgatgaagaggttgctgtaacctctgctgatataagt 807

            
Query: 481 c 481
           |
Sbjct: 808 c 808


>gnl|LJGI|TC59672 similar to UniRef100_A7QI03 Cluster: Chromosome chr17 scaffold_101,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr17 scaffold_101, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (25%)
          Length = 820

 Score =  755 bits (381), Expect = 0.0
 Identities = 384/385 (99%)
 Strand = Plus / Plus

                                                                        
Query: 822  taaacatggtggagtccaagttagaagcagtaagcatggattctgttttggcttcattga 881
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    taaacatggtggagtccaagttagaagcagtaagcatggattctgttttggcttcattga 60

                                                                        
Query: 882  atttgaggatgcgagctccatgcaaagtgcacttgaggctacacctattattgttggtga 941
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   atttgaggatgcgagctccatgcaaagtgcacttgaggctacacctattattgttggtga 120

                                                                        
Query: 942  gcgacaagctgttgttgaggaaaagagaacaactacaagagtcagcggtagtggaagagg 1001
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gcgacaagctgttgttgaggagaagagaacaactacaagagtcagcggtagtggaagagg 180

                                                                        
Query: 1002 gaggtatccttcaggacgaggcggtttccgaagcgagagcttcaggggcggccgagggaa 1061
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gaggtatccttcaggacgaggcggtttccgaagcgagagcttcaggggcggccgagggaa 240

                                                                        
Query: 1062 gtttggtggtggacggggatatggcaggagtgaatttagaagccaaggggagttctcggg 1121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gtttggtggtggacggggatatggcaggagtgaatttagaagccaaggggagttctcggg 300

                                                                        
Query: 1122 gagaccgaggagttctcaacggccaagtcagaatggaggtgggcgaggtggacgtggttt 1181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  gagaccgaggagttctcaacggccaagtcagaatggaggtgggcgaggtggacgtggttt 360

                                     
Query: 1182 gggaaaccgcgattcaacagtgtga 1206
            |||||||||||||||||||||||||
Sbjct: 361  gggaaaccgcgattcaacagtgtga 385