Miyakogusa Predicted Gene

Lj4g3v1720830.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1720830.1 Non Chatacterized Hit- tr|F6H490|F6H490_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,58.67,3e-19,DUF1675,Protein of unknown function DUF1675; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.49632.1
         (582 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69852 weakly similar to UniRef100_A7PAA1 Cluster: Chr...   155   4e-37
gnl|LJGI|TC60694 weakly similar to UniRef100_A7PAA1 Cluster: Chr...   133   1e-30

>gnl|LJGI|TC69852 weakly similar to UniRef100_A7PAA1 Cluster: Chromosome chr14
           scaffold_9, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (28%)
          Length = 780

 Score =  155 bits (78), Expect = 4e-37
 Identities = 180/214 (84%)
 Strand = Plus / Plus

                                                                       
Query: 343 gatgatgcaatggacattctgagacaaatgcctagagtgaccactactggagatggccct 402
           |||||||||||||| || ||||||||||| || || ||||| ||||||||||||||||||
Sbjct: 518 gatgatgcaatggagatcctgagacaaattccaagtgtgactactactggagatggccct 577

                                                                       
Query: 403 aatgggaagagaatcgaaggacttcttcacaagtataagggaggtcaagtttgtattgtg 462
           |||||||||||||  |||||||||||  |||| ||||||   |||||||||  |||||| 
Sbjct: 578 aatgggaagagaaaagaaggacttctgtacaattataagtctggtcaagttactattgta 637

                                                                       
Query: 463 tgtgtctgtcatggtagcttcctctctcccactgaatttgtgatgcatgctggaggaaag 522
           || ||||| ||||||  ||||||| |||| || || ||  | |||||||||||||| || 
Sbjct: 638 tgcgtctgccatggttacttcctcactccaacagagttcatcatgcatgctggaggcaaa 697

                                             
Query: 523 gaagtggctaatcccatgacacacatcactgttt 556
           ||||||||||| |||||||  || ||||||||||
Sbjct: 698 gaagtggctaaccccatgaagcatatcactgttt 731


>gnl|LJGI|TC60694 weakly similar to UniRef100_A7PAA1 Cluster: Chromosome chr14
           scaffold_9, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (17%)
          Length = 873

 Score =  133 bits (67), Expect = 1e-30
 Identities = 175/211 (82%)
 Strand = Plus / Plus

                                                                       
Query: 346 gatgcaatggacattctgagacaaatgcctagagtgaccactactggagatggccctaat 405
           ||||||||||| || ||| || |||| || || ||||| ||||||||||||| |||||||
Sbjct: 605 gatgcaatggagatcctgggaaaaattccaagtgtgactactactggagatgaccctaat 664

                                                                       
Query: 406 gggaagagaatcgaaggacttcttcacaagtataagggaggtcaagtttgtattgtgtgt 465
           ||||||||||| ||||||||| |  |||| ||||||   || |||||   |||||| |||
Sbjct: 665 gggaagagaatagaaggacttttgtacaattataagtctggccaagtcactattgtatgt 724

                                                                       
Query: 466 gtctgtcatggtagcttcctctctcccactgaatttgtgatgcatgctggaggaaaggaa 525
           ||||| ||||||| ||||||| |||| || || ||  | |||||||||||||| ||||||
Sbjct: 725 gtctgccatggtaacttcctcactccaacagagttcatcatgcatgctggaggcaaggaa 784

                                          
Query: 526 gtggctaatcccatgacacacatcactgttt 556
           |||||||| |||||||  || ||||||||||
Sbjct: 785 gtggctaaccccatgaagcatatcactgttt 815