Miyakogusa Predicted Gene
- Lj4g3v1720810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1720810.1 Non Chatacterized Hit- tr|I1JZI1|I1JZI1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25632 PE,78.68,0,Nucleic
acid-binding proteins,Nucleic acid-binding, OB-fold-like; seg,NULL;
rpa1: replication factor,CUFF.49630.1
(1869 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70223 similar to UniRef100_A7PD95 Cluster: Chromosome... 1431 0.0
gnl|LJGI|TC74452 similar to UniRef100_A7PD95 Cluster: Chromosome... 1112 0.0
gnl|LJGI|TC60505 similar to UniRef100_A6BLP0 Cluster: 70 kDa sub... 107 3e-22
gnl|LJGI|GO011030 similar to UniRef100_A7P5G0 Cluster: Chromosom... 84 4e-15
>gnl|LJGI|TC70223 similar to UniRef100_A7PD95 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 785
Score = 1431 bits (722), Expect = 0.0
Identities = 740/746 (99%)
Strand = Plus / Plus
Query: 1 atggccaaatccatcaccccaaacgccgtctccaccttgatctcaaacccctcccctgac 60
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 40 atggccaaatccatcaccccaaacgccatctccaccttgatcgcaaacccctcccctgac 99
Query: 61 tcctcctcagatctccccgaactcattgtccaagtcctcgatctcaaacaaagcggcatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 tcctcctcagatctccccgaactcattgtccaagtcctcgatctcaaacaaagcggcatg 159
Query: 121 aacagatacatgtttgctgcgaatgatggaaaattgaagctgaaggcgattcttccttcc 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 160 aacagatacatgtttgctgcgaacgatggaaaattgaagctgaaggcgattcttccttcc 219
Query: 181 agcatgtactctgaggttctctctgggaatattcagaacttagggttgattcgcatcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 agcatgtactctgaggttctctctgggaatattcagaacttagggttgattcgcatcctt 279
Query: 241 gattacactgtcaatgatatccccaataagcctgagaaataccttattgtgaccaagtgt 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gattacactgtcaatgatatacccaataagcctgagaaataccttattgtgaccaagtgt 339
Query: 301 gaagcggtttctcctgcgcttgaaatggagatcaagactgagcaaaccgctgctggtatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gaagcggtttctcctgcgcttgaaatggagatcaagactgagcaaaccgctgctggtatt 399
Query: 361 gttttgaagcccagggaggacggtggagtcaagagcgaagctgctgctgggattgttctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gttttgaagcccagggaggacggtggagtcaagagcgaagctgctgctgggattgttctg 459
Query: 421 aagccgaagcaggaaatggtgacgaaatcggctgctcagattgtacacgagcaacatgga 480
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 460 aagccgaagcaggaaatggtgaccaaatccgctgctcagattgtacacgagcaacatgga 519
Query: 481 aatgtggctcctgctgcacgaatggcgatgacacgcagggtgcgtcctcttgtttctttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aatgtggctcctgctgcacgaatggcgatgacacgcagggtgcgtcctcttgtttctttg 579
Query: 541 aatccttatcaggctaattggacgattaaggtcagtgttaccagcaaagggaacatgcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 aatccttatcaggctaattggacgattaaggtcagtgttaccagcaaagggaacatgcgt 639
Query: 601 acatataagaatgctagaggggaaggttgtgtcttcaatgttgagttgacagatgaagaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 acatataagaatgctagaggggaaggttgtgtcttcaatgttgagttgacagatgaagaa 699
Query: 661 ggtactcaaattcaagcaacaatgttcaatgatgctgcgaggaaattttatgacaaattt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ggtactcaaattcaagcaacaatgttcaatgatgctgcgaggaaattttatgacaaattt 759
Query: 721 gttttgggaaaggtttactacatttc 746
||||||||||||||||||||||||||
Sbjct: 760 gttttgggaaaggtttactacatttc 785
>gnl|LJGI|TC74452 similar to UniRef100_A7PD95 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 765
Score = 1112 bits (561), Expect = 0.0
Identities = 579/585 (98%)
Strand = Plus / Plus
Query: 1285 ggttcaagtgcaacatcccccaatggagctagatcggtgtatgctgatcgggttccactc 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggttcaagtgcaacatcccccaatggagctagatcggtgtatgctgatcgggttccactc 60
Query: 1345 tctcacataaccactaacacatccctggggcaggacaagcctgtgtttttcagtgttaga 1404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctcacataaccactaacacatccctggggcaggacaagcctgtgtttttcagtgttaga 120
Query: 1405 gggcatataagattcataaagccagatcagacaatgacgtatcgggcctgcaagaatagc 1464
||||||||||| |||||||||||||||||||||||| |||||||||||||||||| | ||
Sbjct: 121 gggcatataagtttcataaagccagatcagacaatgtcgtatcgggcctgcaagacttgc 180
Query: 1465 aataagaaagtaacagaaagctttggtgctgggtactggtgtgaagcttgccagaaaaat 1524
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aataagaaagttactgaaagctttggtgctgggtactggtgtgaagcttgccagaaaaat 240
Query: 1525 gatgaacaatgcagtttaaggtatatcatggttgtaaaagtttctgatgcaagtggtgag 1584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatgaacaatgcagtttaaggtatatcatggttgtaaaagtttctgatgcaagtggtgag 300
Query: 1585 gcttatatctcagtctttaatgatgaagctgagaagattgttgggtgctctgctgatgag 1644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcttatatctcagtctttaatgatgaagctgagaagattgttgggtgctctgctgatgag 360
Query: 1645 ctagacaaccttaagcaacaggagggagaagacaatccttatcagttgaaattgaaacaa 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctagacaaccttaagcaacaggagggagaagacaatccttatcagttgaaattgaaacaa 420
Query: 1705 gctacctgggttccacacctattccgagtcagtgtttctcagaatgagtataacaacgag 1764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gctacctgggttccacacctattccgagtcagtgtttctcagaatgagtataacaacgag 480
Query: 1765 aagaggcaaaggataacagcacgggctgttgttcctgttgactttgctgcggagtcaaga 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aagaggcaaaggataacagcacgggctgttgttcctgttgactttgctgcggagtcaaga 540
Query: 1825 ctcctcttggaagagatatcaaaaatgaaagctgcacaataagat 1869
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctcctcttggaagagatatcaaaaatgaaagctgcacaataagat 585
>gnl|LJGI|TC60505 similar to UniRef100_A6BLP0 Cluster: 70 kDa subunit of replication
protein A; n=1; Ipomoea nil|Rep: 70 kDa subunit of
replication protein A - Ipomoea nil (Japanese morning
glory) (Pharbitis nil), partial (4%)
Length = 752
Score = 107 bits (54), Expect = 3e-22
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 56 ctgactcctcctcagatctccccgaactcattgtccaagtcctcgatctcaaacaaagcg 115
||||||| |||||||||||||||||| |||||| ||||||| |||||||||| |||||||
Sbjct: 462 ctgactcttcctcagatctccccgaaatcattgaccaagtcgtcgatctcaagcaaagcg 403
Query: 116 gcatgaacagatacatgt 133
|||||||| |||||||||
Sbjct: 402 gcatgaaccgatacatgt 385
>gnl|LJGI|GO011030 similar to UniRef100_A7P5G0 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 727
Score = 83.8 bits (42), Expect = 4e-15
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 52 tcccctgactcctcctcagatctccccgaactcattgtccaagtcctcgatctcaaacaa 111
||||||||||| |||||||||||||||||| |||| ||||||||| |||||||||| |||
Sbjct: 553 tcccctgactcttcctcagatctccccgaaatcatcgtccaagtcgtcgatctcaagcaa 612
Query: 112 ag 113
||
Sbjct: 613 ag 614
Score = 79.8 bits (40), Expect = 6e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 351 tgctggtattgttttgaagcccagggaggacggtggagtcaagagcgaagctgctg 406
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 618 tgctggcattgttttgaagcccagggaggattatggagtcaagagcgaagctgctg 673