Miyakogusa Predicted Gene
- Lj4g3v1719780.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1719780.1 tr|Q010E4|Q010E4_OSTTA A84702 probable presenilin
(ISS) (Fragment) OS=Ostreococcus tauri
GN=Ot10g013,47.86,1e-17,PRESENILIN,Peptidase A22A, presenilin;
PRESENILIN HOMOLOG,NULL; Presenilin, signal peptide
peptidase,CUFF.49627.1
(1397 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO026068 similar to UniRef100_A7PDA3 Cluster: Chromosom... 1316 0.0
gnl|LJGI|AI967685 similar to UniRef100_A7PDA3 Cluster: Chromosom... 551 e-156
gnl|LJGI|TC72555 similar to UniRef100_A7Q9Z6 Cluster: Chromosome... 54 2e-06
>gnl|LJGI|GO026068 similar to UniRef100_A7PDA3 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 714
Score = 1316 bits (664), Expect = 0.0
Identities = 680/684 (99%), Gaps = 1/684 (0%)
Strand = Plus / Plus
Query: 1 atggcagaaccagaaccacaaacacgaagaacctcatcaccatcatcatcttcaaccatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 atggcagaaccagaaccacaaacacgaagaacctcatcaccatcatcatcttcaaccatt 91
Query: 61 ctggaccatttgggcgaggaacttgttcgaatcatcgccccagtttcaatctgcatgttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 92 ctggaccatttgggcgaggaacttgttcgaatcatcgccccagtttcaatcggcatgttc 151
Query: 121 ctcgtcgtcatcctggtctcgattctcaacactggctcttccttcgaacgacccacctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 ctcgtcgtcatcctggtctcgattctcaacactggctcttccttcgaacgacccacctcc 211
Query: 181 atagccaccatagcatacgacgagtcgaccatcgactcctcgtgggacaaattcctcggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atagccaccatagcatacgacgagtcgaccatcgactcctcgtgggacaaattcctcggc 271
Query: 241 gcccttctcaactccctagctttcgtcgctatggtcaccttcgcaaccttcatcctcgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gcccttctcaactccctagctttcgtcgctatggtcaccttcgcaaccttcatcctcgtc 331
Query: 301 ctcctcttctatttcaggtgcacgcggtttctcaagctctacatggccttctcatctttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ctcctcttctatttcaggtgcacgcggtttctcaagctctacatggccttctcatctttc 391
Query: 361 gtcgtgctcgcgttcctcggcggcgcggtgtcgctgttcttgatccagcactttggtacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gtcgtgctcgcgttcctcggcggcgcggtgtcgctgttcttgatccagcactttggtacc 451
Query: 421 cctattgattgcgtgacgttctttctggttttgtgtaatttcgctgtggtgggggttatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cctattgattgcgtgacgttctttctggttttgtgtaatttcgctgtggtgggggttatg 511
Query: 481 gcggtgttcatgtcgaaatttgcgattgtagtgacgcaggggtacttggtggttattggg 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 512 gcggtgttcatgtcgaaatttgcgattgtagtgacgcaggggtacttggttgttattggg 571
Query: 541 attctggttgcttactggtgtaccatgttgcctgagtggactacatgggctatgcttgtt 600
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 attctggttgcttactggtttaccatgttgcctgagtggactacatgggctatgcttgtt 631
Query: 601 gctatggcgttgtatgaccttgctgctgttcttttgcctgttgggccgctgaggattttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gctatggcgttgtatgaccttgctgctgttcttttgcctgttgggccgctgaggattttg 691
Query: 661 gtcgagcttgctataacaagggat 684
|||||||||||||| |||||||||
Sbjct: 692 gtcgagcttgctat-acaagggat 714
>gnl|LJGI|AI967685 similar to UniRef100_A7PDA3 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 286
Score = 551 bits (278), Expect = e-156
Identities = 284/286 (99%)
Strand = Plus / Plus
Query: 669 tgctataacaagggatgaagagattccagctttggtttatgaggctaggccagtgaacca 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgctataacaagggatgaagagattccagctttggtttatgaggctaggccagtgaacca 60
Query: 729 tgataatgtggatcctagggaggttgtagctcagagaaggatgtggagagataggaggat 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgataatgtggatcctagggaggttgtagctcagagaaggatgtggagagataggaggat 120
Query: 789 tcagaattcggatggtcgtggtctcagtgctgaacaatcacactttaattcggatgcaag 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcagaattcggatggtcgtggtctcagtgctgaacaatcacactttaattcggatgcaag 180
Query: 849 tactgttcttaattcaaattcgaacagcaatgttccggttggcacgagtttagataggga 908
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tactgttcttaattcaaattccaacagcaatgttccggttggcacgagtttagataggga 240
Query: 909 gaatggttcaaacttgaacactaatagtaatagtactacttatggt 954
||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 241 gaatggttcaaacttgaacactaatagtaatagtactacttctggt 286
>gnl|LJGI|TC72555 similar to UniRef100_A7Q9Z6 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 796
Score = 54.0 bits (27), Expect = 2e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 103 gtttcaatctgcatgttcctcgtcgtc 129
|||||||||||||||||||||||||||
Sbjct: 113 gtttcaatctgcatgttcctcgtcgtc 139