Miyakogusa Predicted Gene
- Lj4g3v1719740.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1719740.2 Non Chatacterized Hit- tr|J3NEE5|J3NEE5_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB12G2,31.42,3e-18,seg,NULL; coiled-coil,NULL,CUFF.49624.2
(1494 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82365 similar to UniRef100_A7PDA5 Cluster: Chromosome... 844 0.0
gnl|LJGI|AU251660 UniRef100_A7P2F2 Cluster: Chromosome chr1 scaf... 72 1e-11
gnl|LJGI|TC77709 weakly similar to UniRef100_A7P2F2 Cluster: Chr... 54 3e-06
>gnl|LJGI|TC82365 similar to UniRef100_A7PDA5 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 772
Score = 844 bits (426), Expect = 0.0
Identities = 432/434 (99%)
Strand = Plus / Plus
Query: 1061 atgatcagaaggaagaagaaagttcagaatctatgagtaaaattgaagctgagcttgaag 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgatcagaaggaagaagaaagttcagaatctatgagtaaaattgaagctgagcttgaag 60
Query: 1121 ctgaacttgagagattggggttcaagatgaatgaatctagtgaggaaagatcactctccg 1180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgaacttgagagattggggttcaagatgaatgaatctagtgaggaaagatcactctccg 120
Query: 1181 agcttgctgaggacactgactttgtagcagatttttctcaaaatgagttgccaactgaca 1240
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 121 agcttgctgaggaccctgactttgtagcagatttttctcaagatgagttgccaactgaca 180
Query: 1241 tgatcagtggaaatgattttgtccatccaaaactaaatgaggatgccaacaacactaaga 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgatcagtggaaatgattttgtccatccaaaactaaatgaggatgccaacaacactaaga 240
Query: 1301 gtttccctgtaaactatgctgtttcacctcatgaactaagcctgcgcttgcatgaagtta 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtttccctgtaaactatgctgtttcacctcatgaactaagcctgcgcttgcatgaagtta 300
Query: 1361 tccaatccagactagagaaacgcgtgcaggagcttgaggtcgcccttcaatatagccaga 1420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tccaatccagactagagaaacgcgtgcaggagcttgaggtcgcccttcaatatagccaga 360
Query: 1421 ggaaattgcaattcgtggaatcagagcatgaatctccagctgcatacattgacacatacg 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaaattgcaattcgtggaatcagagcatgaatctccagctgcatacattgacacatacg 420
Query: 1481 aagatccaatgaag 1494
||||||||||||||
Sbjct: 421 aagatccaatgaag 434
>gnl|LJGI|AU251660 UniRef100_A7P2F2 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr1 scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape), partial (3%)
Length = 376
Score = 71.9 bits (36), Expect = 1e-11
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 1 atggatttgtgggttgttgcagctgttgctggagctgggt 40
||||||||||||||||||||||||| ||||||||||||||
Sbjct: 170 atggatttgtgggttgttgcagctgctgctggagctgggt 209
>gnl|LJGI|TC77709 weakly similar to UniRef100_A7P2F2 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 526
Score = 54.0 bits (27), Expect = 3e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 397 cctttaaactctttagaaagttgcctcatggctcagctatgcaaagcacatgccaaaat 455
|||||||| || ||||||||||| | ||||||||||||| ||||| |||||||||||
Sbjct: 128 cctttaaattccttagaaagttgttttatggctcagctatacaaagagcatgccaaaat 186