Miyakogusa Predicted Gene
- Lj4g3v1709670.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1709670.1 tr|B6U0V2|B6U0V2_MAIZE Hydrolase, hydrolyzing
O-glycosyl compounds OS=Zea mays PE=2 SV=1,46.43,5e-16,Possibly
involved in carbohydrate binding,X8; X8,X8; seg,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT ,CUFF.49622.1
(648 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59937 similar to UniRef100_A7PDB3 Cluster: Chromosome... 1285 0.0
gnl|LJGI|TC62458 743 0.0
gnl|LJGI|TC71015 618 e-177
gnl|LJGI|BW598011 homologue to UniRef100_P93033 Cluster: Fumarat... 92 5e-18
gnl|LJGI|TC64392 similar to UniRef100_A7PDB3 Cluster: Chromosome... 90 2e-17
gnl|LJGI|TC68879 similar to UniRef100_A7PDB3 Cluster: Chromosome... 84 1e-15
gnl|LJGI|TC67247 weakly similar to UniRef100_Q9SD84 Cluster: Glu... 72 5e-12
gnl|LJGI|TC59177 similar to UniRef100_A7PDB3 Cluster: Chromosome... 54 1e-06
>gnl|LJGI|TC59937 similar to UniRef100_A7PDB3 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 1174
Score = 1285 bits (648), Expect = 0.0
Identities = 648/648 (100%)
Strand = Plus / Plus
Query: 1 atggcagctcttgctcttgtagtgcttcttctggccactcacttccattccaatcttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atggcagctcttgctcttgtagtgcttcttctggccactcacttccattccaatcttgct 192
Query: 61 gcaaatgctgctacttggtgcatttgcaaggatgcaagcgatgcaatcctgcagaagaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gcaaatgctgctacttggtgcatttgcaaggatgcaagcgatgcaatcctgcagaagaca 252
Query: 121 ttggattatgcttgtggagctggtgctgattgcaacccactccatacaaacgggccttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttggattatgcttgtggagctggtgctgattgcaacccactccatacaaacgggccttgt 312
Query: 181 ttccaaccaaacactgtcagagctcattgcagctatgcagtgaatagctttttccagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ttccaaccaaacactgtcagagctcattgcagctatgcagtgaatagctttttccagaag 372
Query: 241 aaaggtcaaggacaagggacctgtgactttgcaggaacagccactgctattacatctaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aaaggtcaaggacaagggacctgtgactttgcaggaacagccactgctattacatctaac 432
Query: 301 cccagcattggtagttgtgtctacccttcaagcgctagcgcttctggcactagtacaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cccagcattggtagttgtgtctacccttcaagcgctagcgcttctggcactagtacaacc 492
Query: 361 ccagtgacaactacaccatccttgggcactaccccttcttccacaggcactccatcaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ccagtgacaactacaccatccttgggcactaccccttcttccacaggcactccatcaaca 552
Query: 421 accacaggcactccatcaacaaccattggtattccatcaacaaccactggcaccactcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 accacaggcactccatcaacaaccattggtattccatcaacaaccactggcaccactcca 612
Query: 481 tatagcacaactcctggggtgttaggtgggattggcactggtatggggccttctggaact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tatagcacaactcctggggtgttaggtgggattggcactggtatggggccttctggaact 672
Query: 541 ggcattgatgacagtcatggcgggcttagacttttggacattgctttgttctctccattc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ggcattgatgacagtcatggcgggcttagacttttggacattgctttgttctctccattc 732
Query: 601 tcaatcaccctcttctatggcttgataatgcttttgtgggcttgagaa 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tcaatcaccctcttctatggcttgataatgcttttgtgggcttgagaa 780
>gnl|LJGI|TC62458
Length = 936
Score = 743 bits (375), Expect = 0.0
Identities = 378/379 (99%)
Strand = Plus / Plus
Query: 270 tgcaggaacagccactgctattacatctaaccccagcattggtagttgtgtctacccttc 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tgcaggaacagccactgctattacatctaaccccagcattggtagttgtgtctacccttc 363
Query: 330 aagcgctagcgcttctggcactagtacaaccccagtgacaactacaccatccttgggcac 389
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aagcgctagcgcttctggcattagtacaaccccagtgacaactacaccatccttgggcac 423
Query: 390 taccccttcttccacaggcactccatcaacaaccacaggcactccatcaacaaccattgg 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 taccccttcttccacaggcactccatcaacaaccacaggcactccatcaacaaccattgg 483
Query: 450 tattccatcaacaaccactggcaccactccatatagcacaactcctggggtgttaggtgg 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tattccatcaacaaccactggcaccactccatatagcacaactcctggggtgttaggtgg 543
Query: 510 gattggcactggtatggggccttctggaactggcattgatgacagtcatggcgggcttag 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gattggcactggtatggggccttctggaactggcattgatgacagtcatggcgggcttag 603
Query: 570 acttttggacattgctttgttctctccattctcaatcaccctcttctatggcttgataat 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 acttttggacattgctttgttctctccattctcaatcaccctcttctatggcttgataat 663
Query: 630 gcttttgtgggcttgagaa 648
|||||||||||||||||||
Sbjct: 664 gcttttgtgggcttgagaa 682
Score = 218 bits (110), Expect = 3e-56
Identities = 113/114 (99%)
Strand = Plus / Plus
Query: 1 atggcagctcttgctcttgtagtgcttcttctggccactcacttccattccaatcttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 atggcagctcttgctcttgtagtgcttcttctggccactcacttccattccaatcttgct 254
Query: 61 gcaaatgctgctacttggtgcatttgcaaggatgcaagcgatgcaatcctgcag 114
||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 255 gcaaatgctgctacttggtgcatttgcgaggatgcaagcgatgcaatcctgcag 308
>gnl|LJGI|TC71015
Length = 537
Score = 618 bits (312), Expect = e-177
Identities = 312/312 (100%)
Strand = Plus / Plus
Query: 337 agcgcttctggcactagtacaaccccagtgacaactacaccatccttgggcactacccct 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 agcgcttctggcactagtacaaccccagtgacaactacaccatccttgggcactacccct 175
Query: 397 tcttccacaggcactccatcaacaaccacaggcactccatcaacaaccattggtattcca 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 tcttccacaggcactccatcaacaaccacaggcactccatcaacaaccattggtattcca 235
Query: 457 tcaacaaccactggcaccactccatatagcacaactcctggggtgttaggtgggattggc 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 tcaacaaccactggcaccactccatatagcacaactcctggggtgttaggtgggattggc 295
Query: 517 actggtatggggccttctggaactggcattgatgacagtcatggcgggcttagacttttg 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 actggtatggggccttctggaactggcattgatgacagtcatggcgggcttagacttttg 355
Query: 577 gacattgctttgttctctccattctcaatcaccctcttctatggcttgataatgcttttg 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gacattgctttgttctctccattctcaatcaccctcttctatggcttgataatgcttttg 415
Query: 637 tgggcttgagaa 648
||||||||||||
Sbjct: 416 tgggcttgagaa 427
>gnl|LJGI|BW598011 homologue to UniRef100_P93033 Cluster: Fumarate hydratase 1,
mitochondrial precursor; n=1; Arabidopsis thaliana|Rep:
Fumarate hydratase 1, mitochondrial precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (11%)
Length = 486
Score = 91.7 bits (46), Expect = 5e-18
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 247 caaggacaagggacctgtgactttgcaggaacagccactgctattacatc 296
|||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 113 caaggacaagggacctgtgagtttgcaggaacagccactgctattacatc 162
>gnl|LJGI|TC64392 similar to UniRef100_A7PDB3 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 797
Score = 89.7 bits (45), Expect = 2e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 230 ttttccagaagaaaggtcaaggacaagggacctgtgactttgcaggaacagccactgcta 289
||||||||| ||||| ||| |||||||||||||||| ||||||||||| ||||||||||
Sbjct: 654 ttttccagaggaaagcccaaagacaagggacctgtgagtttgcaggaactgccactgcta 713
Query: 290 ttacatctaaccc 302
|||||||| ||||
Sbjct: 714 ttacatctgaccc 726
>gnl|LJGI|TC68879 similar to UniRef100_A7PDB3 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (57%)
Length = 1172
Score = 83.8 bits (42), Expect = 1e-15
Identities = 92/109 (84%), Gaps = 6/109 (5%)
Strand = Plus / Plus
Query: 471 caccactccatatagcacaactcctggggtgttaggtgggattggcactggtatggggcc 530
||||||||||| ||| |||||||||| |||||||| |||||||||||||| ||||| ||
Sbjct: 604 caccactccattcagctcaactcctggtgtgttaggagggattggcactggcatgggccc 663
Query: 531 ttctggaactggcatt------gatgacagtcatggcgggcttagactt 573
||||||| ||||| | |||||||||||||| ||||||||||||
Sbjct: 664 ttctggagttggcactaattcagatgacagtcatggtgggcttagactt 712
Score = 71.9 bits (36), Expect = 5e-12
Identities = 170/212 (80%), Gaps = 2/212 (0%)
Strand = Plus / Plus
Query: 74 cttggtgcatttgcaaggatgcaagcgatgcaatcctgcagaagacattggattatgctt 133
|||||||| |||||||||||| || ||| || | | ||||||| | | || |||||||
Sbjct: 234 cttggtgcgtttgcaaggatggaaacgaagcgagcttgcagaaagcgctagactatgctt 293
Query: 134 gtggagctggtgctgattgcaacccactccatacaaacgggcc-ttgtttccaaccaaac 192
|||||||||| ||||| || ||||| || | |||||| |||| ||| | | | ||||||
Sbjct: 294 gtggagctggggctgactgtaaccccatcaa-acaaactggcccttgctacaacccaaac 352
Query: 193 actgtcagagctcattgcagctatgcagtgaatagctttttccagaagaaaggtcaagga 252
|||||||||||||| || | ||||||||| || |||| |||||||| || ||||||| |
Sbjct: 353 actgtcagagctcactgtaactatgcagttaacagctacttccagaaaaagggtcaagca 412
Query: 253 caagggacctgtgactttgcaggaacagccac 284
| | | | ||||||||||||||| |||||||
Sbjct: 413 ccattggcttgtgactttgcaggagcagccac 444
>gnl|LJGI|TC67247 weakly similar to UniRef100_Q9SD84 Cluster: Glucan
endo-1,3-beta-glucosidase-like protein 3 precursor; n=1;
Arabidopsis thaliana|Rep: Glucan
endo-1,3-beta-glucosidase-like protein 3 precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (44%)
Length = 750
Score = 71.9 bits (36), Expect = 5e-12
Identities = 170/212 (80%), Gaps = 2/212 (0%)
Strand = Plus / Plus
Query: 74 cttggtgcatttgcaaggatgcaagcgatgcaatcctgcagaagacattggattatgctt 133
|||||||| |||||||||||| || ||| || | | ||||||| | | || |||||||
Sbjct: 259 cttggtgcgtttgcaaggatggaaacgaagcgagcttgcagaaagcgctagactatgctt 318
Query: 134 gtggagctggtgctgattgcaacccactccatacaaacgggcc-ttgtttccaaccaaac 192
|||||||||| ||||| || ||||| || | |||||| |||| ||| | | | ||||||
Sbjct: 319 gtggagctggggctgactgtaaccccatcaa-acaaactggcccttgctacaacccaaac 377
Query: 193 actgtcagagctcattgcagctatgcagtgaatagctttttccagaagaaaggtcaagga 252
|||||||||||||| || | ||||||||| || |||| |||||||| || ||||||| |
Sbjct: 378 actgtcagagctcactgtaactatgcagttaacagctacttccagaaaaagggtcaagca 437
Query: 253 caagggacctgtgactttgcaggaacagccac 284
| | | | ||||||||||||||| |||||||
Sbjct: 438 ccattggcttgtgactttgcaggagcagccac 469
>gnl|LJGI|TC59177 similar to UniRef100_A7PDB3 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 918
Score = 54.0 bits (27), Expect = 1e-06
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 178 tgtttccaaccaaacactgtcagagctcattgcagctatgcagtgaatagctttttccag 237
||||||||||| |||||||| | | ||| ||||||||||| || ||||||| |||||||
Sbjct: 398 tgtttccaacccaacactgtgaaggatcactgcagctatgctgtcaatagctatttccag 457
Query: 238 aagaaaggtca 248
|| || |||||
Sbjct: 458 aaaaagggtca 468