Miyakogusa Predicted Gene
- Lj4g3v1709660.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1709660.1 Non Chatacterized Hit- tr|C6TG10|C6TG10_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,78.95,8e-18,Tmemb_40,Uncharacterised protein family,
transmembrane-40; INTEGRAL MEMBRANE PROTEIN GPR175
[SOURCE,CUFF.49616.1
(555 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70364 weakly similar to UniRef100_A7QWZ7 Cluster: Chr... 1092 0.0
gnl|LJGI|TC59694 weakly similar to UniRef100_A8JEE8 Cluster: Pre... 121 5e-27
gnl|LJGI|TC75917 similar to UniRef100_A7QWZ7 Cluster: Chromosome... 72 4e-12
>gnl|LJGI|TC70364 weakly similar to UniRef100_A7QWZ7 Cluster: Chromosome chr14
scaffold_211, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_211, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (76%)
Length = 1196
Score = 1092 bits (551), Expect = 0.0
Identities = 554/555 (99%)
Strand = Plus / Plus
Query: 1 atgctatgtctagagataagcttgatggctttcttacttaaggataactacatgaatgcc 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 451 atgctatgtctagagataagcttgatggctttcttactaaaggataactacatgaatgcc 510
Query: 61 atggaagctctagcacacactttcattgtatcaggaattattgtctttgtggatatcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 atggaagctctagcacacactttcattgtatcaggaattattgtctttgtggatatcctt 570
Query: 121 cttaaggcaatctatgtttttggatttggggtcccattgttcaataatgatgttggaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 cttaaggcaatctatgtttttggatttggggtcccattgttcaataatgatgttggaagc 630
Query: 181 actgatacaatcaagtggtgcttgtggatagtacataaattattgctcgctgcagcatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 actgatacaatcaagtggtgcttgtggatagtacataaattattgctcgctgcagcatat 690
Query: 241 ggcttcattttatttgtacacttctctaaatggagagaaaagctgcctccgaggccagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ggcttcattttatttgtacacttctctaaatggagagaaaagctgcctccgaggccagct 750
Query: 301 ttttacaactacgttgttgtgatgtttgtcttcagtgctgttactctgtttgcttgtggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ttttacaactacgttgttgtgatgtttgtcttcagtgctgttactctgtttgcttgtggg 810
Query: 361 ctatcaggaattggcgctggccttggcagttggttgtataatcttactgtgctttgttat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 ctatcaggaattggcgctggccttggcagttggttgtataatcttactgtgctttgttat 870
Query: 421 cactcattatatcttccatttctgtatgtaacttttctagcagattttttccaggaggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 cactcattatatcttccatttctgtatgtaacttttctagcagattttttccaggaggaa 930
Query: 481 gatttccttttggataacgcatattactctgaaatgaaagatgctggattctttgatgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 gatttccttttggataacgcatattactctgaaatgaaagatgctggattctttgatgct 990
Query: 541 gagtgggaataattc 555
|||||||||||||||
Sbjct: 991 gagtgggaataattc 1005
>gnl|LJGI|TC59694 weakly similar to UniRef100_A8JEE8 Cluster: Predicted protein; n=1;
Chlamydomonas reinhardtii|Rep: Predicted protein -
Chlamydomonas reinhardtii, partial (3%)
Length = 795
Score = 121 bits (61), Expect = 5e-27
Identities = 98/109 (89%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 12 agagataagcttgatggctttcttacttaaggataactacatgaatgccatggaagctct 71
||||||||||||||||||||||||| | |||| ||| ||||||||| ||||||| |||||
Sbjct: 609 agagataagcttgatggctttcttattgaagggtaattacatgaattccatggaggctct 668
Query: 72 agcacacactttcattgtatcaggaattattgtctttgtggatatcctt 120
|||| | || ||| ||||||||||||||||| |||||||||||||||||
Sbjct: 669 agcata-acgttctttgtatcaggaattattatctttgtggatatcctt 716
>gnl|LJGI|TC75917 similar to UniRef100_A7QWZ7 Cluster: Chromosome chr14 scaffold_211,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_211, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 1295
Score = 71.9 bits (36), Expect = 4e-12
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 442 ctgtatgtaacttttctagcagattttttccaggaggaagatttccttttggataacgca 501
|||||| |||| ||||||||||| |||||||||||||| || || ||||| || |
Sbjct: 979 ctgtatataacatttctagcagactttttccaggaggaggacttgaacttggagaatgtg 1038
Query: 502 tattactctgaaatgaaagatgctggattctt 533
|||||||||||||||||||||||||| |||||
Sbjct: 1039 tattactctgaaatgaaagatgctggtttctt 1070