Miyakogusa Predicted Gene

Lj4g3v1684380.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1684380.1 tr|F2EID4|F2EID4_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,44.12,3e-18,seg,NULL,CUFF.49601.1
         (972 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV776485 similar to UniRef100_A7PDC8 Cluster: Chromosom...   163   3e-39

>gnl|LJGI|AV776485 similar to UniRef100_A7PDC8 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (7%)
          Length = 365

 Score =  163 bits (82), Expect = 3e-39
 Identities = 82/82 (100%)
 Strand = Plus / Minus

                                                                       
Query: 891 agagctgaacatagacactttcagggtgaatgagatatttgcggttgttggggaagaaat 950
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 agagctgaacatagacactttcagggtgaatgagatatttgcggttgttggggaagaaat 306

                                 
Query: 951 gcatgttagcataggttgaagc 972
           ||||||||||||||||||||||
Sbjct: 305 gcatgttagcataggttgaagc 284