Miyakogusa Predicted Gene
- Lj4g3v1683150.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1683150.1 Non Chatacterized Hit- tr|I1MTX3|I1MTX3_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,78.49,0,Leucine-rich
repeats, typical (most populate,Leucine-rich repeat, typical subtype;
Serine/Threonine ,CUFF.49579.1
(3267 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73102 1082 0.0
gnl|LJGI|TC71075 similar to UniRef100_A7PDH2 Cluster: Chromosome... 950 0.0
gnl|LJGI|AV408059 weakly similar to UniRef100_A7PDH2 Cluster: Ch... 74 6e-12
>gnl|LJGI|TC73102
Length = 791
Score = 1082 bits (546), Expect = 0.0
Identities = 546/546 (100%)
Strand = Plus / Plus
Query: 1 atgtcacagcaggaaacacaatcctgtggtggcttcctattactcctttcctggatcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atgtcacagcaggaaacacaatcctgtggtggcttcctattactcctttcctggatcctt 305
Query: 61 ctttcaggtacagtttttgctggggattctttggacacagacaaacaggttctgttgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ctttcaggtacagtttttgctggggattctttggacacagacaaacaggttctgttgaag 365
Query: 121 ctgaaggactatctagataacagaactcttgcagatcaaggagtttacataaattggaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ctgaaggactatctagataacagaactcttgcagatcaaggagtttacataaattggaac 425
Query: 181 accaccacctccaacccttgtgaatggcaaggaatcaggtgcagcagagggagcagagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 accaccacctccaacccttgtgaatggcaaggaatcaggtgcagcagagggagcagagtg 485
Query: 241 gttggtgtatacctctccggcagcgacatcaccggggagatattccagagcttctcggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gttggtgtatacctctccggcagcgacatcaccggggagatattccagagcttctcggag 545
Query: 301 ctaacagaactcacacaccttgatctctctcagaacacactctttggagggattcctgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ctaacagaactcacacaccttgatctctctcagaacacactctttggagggattcctgag 605
Query: 361 gatttgaggcgctgccaaaagctggttcatctcaacctgtcacataatattcttgatggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gatttgaggcgctgccaaaagctggttcatctcaacctgtcacataatattcttgatggg 665
Query: 421 gtgctgaatttgaccgggttcacaggcttggaaacacttgacttgtccatgaatagattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gtgctgaatttgaccgggttcacaggcttggaaacacttgacttgtccatgaatagattt 725
Query: 481 caaggggagcttgggttgaatttcaatttccctgccatttgtggaaatttagtcactttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 caaggggagcttgggttgaatttcaatttccctgccatttgtggaaatttagtcactttg 785
Query: 541 aatgtc 546
||||||
Sbjct: 786 aatgtc 791
>gnl|LJGI|TC71075 similar to UniRef100_A7PDH2 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 787
Score = 950 bits (479), Expect = 0.0
Identities = 479/479 (100%)
Strand = Plus / Plus
Query: 2789 gagatgtgaaggctagcaatgttttgctagagaaagatgggaaggccaaagttacagact 2848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagatgtgaaggctagcaatgttttgctagagaaagatgggaaggccaaagttacagact 60
Query: 2849 ttgggcttgcaagagtggttgatgtaggggatagccatgtgagcaccatggtggctggga 2908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgggcttgcaagagtggttgatgtaggggatagccatgtgagcaccatggtggctggga 120
Query: 2909 cagtgggttatgttgcgccggaatatggacagacgtggcaagccaccacgaaaggcgatg 2968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagtgggttatgttgcgccggaatatggacagacgtggcaagccaccacgaaaggcgatg 180
Query: 2969 tttacagttttggggtgctggttatggagcttgcgacagcgaggcgcgctgtggatggag 3028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttacagttttggggtgctggttatggagcttgcgacagcgaggcgcgctgtggatggag 240
Query: 3029 gggaagagtgtttggtggaatgggctaggcgtgtgacgcgtcatgggtcgagccgccgct 3088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggaagagtgtttggtggaatgggctaggcgtgtgacgcgtcatgggtcgagccgccgct 300
Query: 3089 ctgtgccagttttgctcatgggtactggacttgttggtggggtggaggagatgggtgagt 3148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgtgccagttttgctcatgggtactggacttgttggtggggtggaggagatgggtgagt 360
Query: 3149 tgctgagaattggtgtgaagtgtacttctgaggtgcctcatgctagacctaacatgaagg 3208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgctgagaattggtgtgaagtgtacttctgaggtgcctcatgctagacctaacatgaagg 420
Query: 3209 aagttctggctatgttggttaagatatctaacctcagaggggactctagttattgacac 3267
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagttctggctatgttggttaagatatctaacctcagaggggactctagttattgacac 479
>gnl|LJGI|AV408059 weakly similar to UniRef100_A7PDH2 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 280
Score = 73.8 bits (37), Expect = 6e-12
Identities = 151/189 (79%)
Strand = Plus / Plus
Query: 1828 ccacttgtggtcttgaacatgactagaaacaaattttcaggtgaaatcccttcagaactt 1887
|||||||| || ||||||||||| |||||||| ||||| |||||||| || || ||
Sbjct: 49 ccacttgttgtattgaacatgaccagaaacaatttttctggtgaaattccaatgaaaatt 108
Query: 1888 ggcaacatgaaatgcatgcagatgctggacttgtctttcaacaatttctctaagactttt 1947
||||||||||| ||| |||||| |||| |||||| ||||||||||| ||| |||
Sbjct: 109 ggcaacatgaagtgcttgcagaatttggatctgtcttggaacaatttctcagggacattt 168
Query: 1948 cccacaagtttgaacagattggctcagcttaacaagttcaacatctcctacaaccccttc 2007
|| |||||||| | |||| | |||||| || |||||||||||| ||||| ||||||
Sbjct: 169 ccttcaagtttggttaacttggatgagcttagcaggttcaacatctcatacaatcccttc 228
Query: 2008 atatctggt 2016
|||||||||
Sbjct: 229 atatctggt 237