Miyakogusa Predicted Gene
- Lj4g3v1635320.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1635320.1 Non Chatacterized Hit- tr|I1JZP1|I1JZP1_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,83.85,0,seg,NULL; PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide
repea,gene.g55382.t1.1
(1960 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS320517 weakly similar to UniRef100_A7PDL8 Cluster: Ch... 1176 0.0
gnl|LJGI|TC80038 119 7e-26
>gnl|LJGI|FS320517 weakly similar to UniRef100_A7PDL8 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 790
Score = 1176 bits (593), Expect = 0.0
Identities = 593/593 (100%)
Strand = Plus / Plus
Query: 1 atggcaccagtttggttctcacacagtgttcactcatcctcaaaccggttcgttcttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 atggcaccagtttggttctcacacagtgttcactcatcctcaaaccggttcgttcttgct 257
Query: 61 gcaaccactctccattctccatctctttccctctctcgttgtattcatctccttcattct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gcaaccactctccattctccatctctttccctctctcgttgtattcatctccttcattct 317
Query: 121 ccccagccaaatccacaccacccagtggaacctgcaatcaacttagcgcctattccacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ccccagccaaatccacaccacccagtggaacctgcaatcaacttagcgcctattccacac 377
Query: 181 cacaaacgaaaccaaccaacacccatctcgtctttccctccatctcacaaagaacaggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cacaaacgaaaccaaccaacacccatctcgtctttccctccatctcacaaagaacaggtg 437
Query: 241 atttctaccataaaatctgtttcccagaaaccccatttgcttcaaatccatgctcacatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 atttctaccataaaatctgtttcccagaaaccccatttgcttcaaatccatgctcacatt 497
Query: 301 gtttgcacaaccctcgttcatgaccctgcagtttctcttcacttcttgtcccgggtagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gtttgcacaaccctcgttcatgaccctgcagtttctcttcacttcttgtcccgggtagct 557
Query: 361 ctctctggccctttgcaagaccccatctattcccgccgattcttcgagcaaatcaaccga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ctctctggccctttgcaagaccccatctattcccgccgattcttcgagcaaatcaaccga 617
Query: 421 cccattgtctcccatttcaacaccatgatcagagcttattccatgagtgattcacctcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cccattgtctcccatttcaacaccatgatcagagcttattccatgagtgattcacctcaa 677
Query: 481 aagggtctctatttgtatcgggatatgagaagaagaggcattgctgccaaccctttatcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aagggtctctatttgtatcgggatatgagaagaagaggcattgctgccaaccctttatcg 737
Query: 541 tcttcctttgctgtgaagtcatgtatcaggtttctggatattgttggtggtgt 593
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tcttcctttgctgtgaagtcatgtatcaggtttctggatattgttggtggtgt 790
>gnl|LJGI|TC80038
Length = 957
Score = 119 bits (60), Expect = 7e-26
Identities = 63/64 (98%)
Strand = Plus / Plus
Query: 1897 cttagggaccataaacggtttcaccacttccgcggagggcaatgctcctgtagcgactac 1956
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttagggaccatacacggtttcaccacttccgcggagggcaatgctcctgtagcgactac 60
Query: 1957 tggt 1960
||||
Sbjct: 61 tggt 64