Miyakogusa Predicted Gene

Lj4g3v1635280.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1635280.1 Non Chatacterized Hit- tr|I1JZP4|I1JZP4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.842 PE=4,71.64,9e-18,no
description,Copper amine oxidase, N2/N3-terminal; DUF3223,Protein of
unknown function DUF3223; se,CUFF.49520.1
         (645 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS344178 weakly similar to UniRef100_A7PDM0 Cluster: Ch...   111   5e-24

>gnl|LJGI|FS344178 weakly similar to UniRef100_A7PDM0 Cluster: Chromosome chr17
           scaffold_12, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (57%)
          Length = 786

 Score =  111 bits (56), Expect = 5e-24
 Identities = 230/288 (79%)
 Strand = Plus / Plus

                                                                       
Query: 231 caaaagcttcgactcttccagggagatgttcgattacttctacaatttccttcatgtttg 290
           |||||||||||  ||||||  |||||||||| ||||||||| ||| || |||||||  ||
Sbjct: 347 caaaagcttcgcgtcttcctcggagatgttccattacttcttcaactttcttcatgcctg 406

                                                                       
Query: 291 gcctcctaatgttaatctcaacaagtatgaacacatggtgttactggaattgcttaagaa 350
           |||||    | | ||| | ||| |||| ||||| ||| ||||  ||||||||||||||||
Sbjct: 407 gcctcaatctatcaatgttaacgagtacgaacatatgatgttgttggaattgcttaagaa 466

                                                                       
Query: 351 tggccacacggagcctgatgaaaagattggcggaggaattcttgctttccaagtccgcaa 410
            || ||  | ||| |||||   |||||||| ||||| ||||  |||||||||||||||||
Sbjct: 467 agggcatgcagaggctgataggaagattggtggagggattcgcgctttccaagtccgcaa 526

                                                                       
Query: 411 gcatcctatgtggaaaagtaggtgtttcttcctcatcagggaggatgaatctattgatga 470
           ||||||    |  |  || ||||| || ||||| ||||||||||| |  |||| ||| ||
Sbjct: 527 gcatcccgcctttagtagcaggtgctttttcctaatcagggaggacggctctactgacga 586

                                                           
Query: 471 ttttagcttccgtaaatgtgtggatcatattcttccattgccagaaga 518
           ||| |||||||| || |||||||||||||||||||| |||||||||||
Sbjct: 587 tttcagcttccgaaagtgtgtggatcatattcttcccttgccagaaga 634