Miyakogusa Predicted Gene
- Lj4g3v1630970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1630970.1 tr|I3RSY3|I3RSY3_LOTJA R2R3MYB transcription
factor (Fragment) OS=Lotus japonicus GN=MYB31 PE=2
SV=1,99.62,0,seg,NULL; Myb_DNA-binding,SANT/Myb domain;
MYB_LIKE,Myb-like domain; HTH_MYB,Myb domain; MYB DNA BIN,CUFF.49502.1
(813 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57252 homologue to UniRef100_A7PDM5 Cluster: Chromoso... 1604 0.0
gnl|LJGI|GO012249 homologue to UniRef100_Q0PJD8 Cluster: MYB tra... 133 2e-30
gnl|LJGI|AU088761 homologue to UniRef100_Q0PJD5 Cluster: MYB tra... 113 2e-24
gnl|LJGI|GO025435 homologue to UniRef100_A7Q9Z3 Cluster: Chromos... 70 2e-11
gnl|LJGI|TC82622 UniRef100_Q84PP5 Cluster: Transcription factor ... 64 1e-09
gnl|LJGI|NP675421 GB|AB108650.1|BAC75673.1 transcription factor ... 56 4e-07
>gnl|LJGI|TC57252 homologue to UniRef100_A7PDM5 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 1483
Score = 1604 bits (809), Expect = 0.0
Identities = 812/813 (99%)
Strand = Plus / Plus
Query: 1 atgagatgcagtaaaagctgtagacttagatggactaactatcttcgtcccggtatcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 atgagatgcagtaaaagctgtagacttagatggactaactatcttcgtcccggtatcaaa 342
Query: 61 cgaggtaacttcacggatcaagaggagaagatgatcatccacctccaagcccttttggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cgaggtaacttcacggatcaagaggagaagatgatcatccacctccaagcccttttggga 402
Query: 121 aacagatgggctgctatagcttcataccttcctcagaggacagacaatgacataaagaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 aacagatgggctgctatagcttcataccttcctcagaggacagacaatgacataaagaat 462
Query: 181 ttctggaacacccatttgaagaagaatctaaacaaagaccaaagtgggagtgaagagggt 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 463 ttctggaacacccatttgaagaagaagctaaacaaagaccaaagtgggagtgaagagggt 522
Query: 241 catgaccatgaaggacattctccttcctcttcttcttcccaacagataaagggtcagtgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 catgaccatgaaggacattctccttcctcttcttcttcccaacagataaagggtcagtgg 582
Query: 301 gagagaaggctccaaacagatatccacatggccaaacaagccttatctgatgctttgtcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gagagaaggctccaaacagatatccacatggccaaacaagccttatctgatgctttgtcc 642
Query: 361 cttaataatgtttcacctgaaaccaagccctcaccttctcatgcatccaccacatacgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 cttaataatgtttcacctgaaaccaagccctcaccttctcatgcatccaccacatacgca 702
Query: 421 tcaagctatgaaaacattgctcgattgatggaaaactgggtgaaaacaactccaagttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 tcaagctatgaaaacattgctcgattgatggaaaactgggtgaaaacaactccaagttca 762
Query: 481 gttgagacaaactcctcatcaggttattcaatcagcaacgtggtcaccactggatctagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 gttgagacaaactcctcatcaggttattcaatcagcaacgtggtcaccactggatctagt 822
Query: 541 tctagtgaaggagggcaatccaccacgacgtgcgcgcaagatcatgcttttgattacttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 tctagtgaaggagggcaatccaccacgacgtgcgcgcaagatcatgcttttgattacttg 882
Query: 601 ttgaccttcaaattatgtgatggcggatctcgatctaggtcagttgaagagaacaacaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 ttgaccttcaaattatgtgatggcggatctcgatctaggtcagttgaagagaacaacaag 942
Query: 661 aaggagggtatcttccaagatctgaagacaggtttcgagacacaagtccctctcacgctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 aaggagggtatcttccaagatctgaagacaggtttcgagacacaagtccctctcacgctg 1002
Query: 721 ctggagaagtggctctgtgatgaaggagctgctcaatgccatgaagatctcataaacatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 ctggagaagtggctctgtgatgaaggagctgctcaatgccatgaagatctcataaacatg 1062
Query: 781 tcactggaagaaagttccacaggtttgttttag 813
|||||||||||||||||||||||||||||||||
Sbjct: 1063 tcactggaagaaagttccacaggtttgttttag 1095
>gnl|LJGI|GO012249 homologue to UniRef100_Q0PJD8 Cluster: MYB transcription factor
MYB187; n=1; Glycine max|Rep: MYB transcription factor
MYB187 - Glycine max (Soybean), partial (50%)
Length = 756
Score = 133 bits (67), Expect = 2e-30
Identities = 166/199 (83%)
Strand = Plus / Plus
Query: 7 tgcagtaaaagctgtagacttagatggactaactatcttcgtcccggtatcaaacgaggt 66
|||||||| ||||| |||||||||||||| || || || | || || |||||| | |||
Sbjct: 258 tgcagtaagagctgcagacttagatggaccaattacctgaggccaggaatcaaaaggggt 317
Query: 67 aacttcacggatcaagaggagaagatgatcatccacctccaagcccttttgggaaacaga 126
|||||||| || ||||||||||||||||| ||||| || ||||| ||||| || ||||||
Sbjct: 318 aacttcacagaacaagaggagaagatgataatccatcttcaagcacttttagggaacaga 377
Query: 127 tgggctgctatagcttcataccttcctcagaggacagacaatgacataaagaatttctgg 186
|||||||| ||||| ||||||| || ||||| |||||||||||||| || || | |||
Sbjct: 378 tgggctgcaatagccgcatacctaccacagagaacagacaatgacatcaaaaactattgg 437
Query: 187 aacacccatttgaagaaga 205
||||| ||||||||||||
Sbjct: 438 aacacttatttgaagaaga 456
Score = 56.0 bits (28), Expect = 4e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 292 ggtcagtgggagagaaggctccaaacagatatccacatggccaa 335
||||| ||||| ||||| |||||||||||||| |||||||||||
Sbjct: 540 ggtcaatgggaaagaagactccaaacagatattcacatggccaa 583
>gnl|LJGI|AU088761 homologue to UniRef100_Q0PJD5 Cluster: MYB transcription factor
MYB60; n=1; Glycine max|Rep: MYB transcription factor
MYB60 - Glycine max (Soybean), partial (32%)
Length = 254
Score = 113 bits (57), Expect = 2e-24
Identities = 112/129 (86%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 79 caagaggagaagatgatcatccacctccaagcccttttgggaaacagatgggctgctata 138
||||||||||||||||| |||||||| |||| ||| | ||||||||||||||||| |||
Sbjct: 15 caagaggagaagatgataatccaccttcaagatcttctaggaaacagatgggctgcaata 74
Query: 139 gcttcataccttcctcagag-gacagacaatgacataaagaatttctggaacacccattt 197
|||||||||||||| || || ||||| ||||||||||| || | ||||||||||||||
Sbjct: 75 gcttcataccttccacaaagaaacagataatgacataaaaaactattggaacacccattt 134
Query: 198 gaagaagaa 206
||| |||||
Sbjct: 135 gaaaaagaa 143
>gnl|LJGI|GO025435 homologue to UniRef100_A7Q9Z3 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 604
Score = 69.9 bits (35), Expect = 2e-11
Identities = 77/91 (84%)
Strand = Plus / Plus
Query: 116 tgggaaacagatgggctgctatagcttcataccttcctcagaggacagacaatgacataa 175
|||| |||| |||||| || |||||||| |||||||| || || ||||| ||||||||||
Sbjct: 306 tgggtaacaaatgggcagccatagcttcctaccttccacaaagaacagataatgacataa 365
Query: 176 agaatttctggaacacccatttgaagaagaa 206
|||||| |||||||| ||| | ||||||||
Sbjct: 366 agaattattggaacacacatcttaagaagaa 396
>gnl|LJGI|TC82622 UniRef100_Q84PP5 Cluster: Transcription factor MYB101; n=1; Lotus
japonicus|Rep: Transcription factor MYB101 - Lotus
japonicus, partial (98%)
Length = 1068
Score = 63.9 bits (32), Expect = 1e-09
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 156 gaggacagacaatgacataaagaatttctggaacacccatttgaagaa 203
|||||| || ||||| || |||||||||||||||||||||||||||||
Sbjct: 315 gaggactgataatgaaatcaagaatttctggaacacccatttgaagaa 362
>gnl|LJGI|NP675421 GB|AB108650.1|BAC75673.1 transcription factor MYB103 [Lotus
japonicus]
Length = 924
Score = 56.0 bits (28), Expect = 4e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 156 gaggacagacaatgacataaagaatttctggaacacccatttgaagaa 203
|||||| || ||||| || |||||||| ||||||||||||||||||||
Sbjct: 294 gaggactgataatgagattaagaatttatggaacacccatttgaagaa 341