Miyakogusa Predicted Gene
- Lj4g3v1617880.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1617880.3 Non Chatacterized Hit- tr|F2TYE3|F2TYE3_SALS5
Putative uncharacterized protein OS=Salpingoeca sp. (s,33.12,8e-19,no
description,NULL; ABC TRANSPORTER,NULL; ATP-BINDING CASSETTE
TRANSPORTER SUBFAMILY A (ABCA),ABC t,CUFF.49606.3
(753 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62362 similar to UniRef100_A7QI68 Cluster: Chromosome... 1413 0.0
gnl|LJGI|TC72727 similar to UniRef100_A7QI68 Cluster: Chromosome... 424 e-118
gnl|LJGI|TC63647 similar to UniRef100_A7QI68 Cluster: Chromosome... 341 4e-93
gnl|LJGI|TC80520 similar to UniRef100_A7QI68 Cluster: Chromosome... 159 3e-38
>gnl|LJGI|TC62362 similar to UniRef100_A7QI68 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 1112
Score = 1413 bits (713), Expect = 0.0
Identities = 743/753 (98%)
Strand = Plus / Plus
Query: 1 atgggtggaatatatactagtatgggtgtatgcccacaacatgacttattgtgggaagtt 60
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 13 atgggtgggatatatactagtatgggtgtatgcccacaacatgacttgctgtgggatgtt 72
Query: 61 ttgactggaagagagcacctgctcttttatggcagacttaaaaatctgaaaggttcagcc 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 73 ttgactggaagagagcacctgctcttttatggcagacttaaaaatcttaaaggttcagcc 132
Query: 121 ttaaaacaggcagtggaagaatctttgaaaagtgtaaatctttttcacggaggagttgct 180
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ttaacacaagcagtggaagaatctttgaaaagtgtaaatctttttcacggaggagttgct 192
Query: 181 gctaaacaagctggaaagtacagcggcggaatgaagaggaggcttagtgttgcaatttca 240
| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 193 gataaacaagctggaaaatacagcggcggaatgaagaggaggcttagtgtagcaatttca 252
Query: 241 ttaatcggagatcctagagttgtttatatggatgagcccagtactggattagacccagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttaatcggagatcctagagttgtttatatggatgagcccagtactggattagacccagca 312
Query: 301 tcaagaaacagcttatggaatgttgttaagcgtgctaaacaaaatcgcgcaatcattctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tcaagaaacagcttatggaatgttgttaagcgtgctaaacaaaatcgcgcaatcattctc 372
Query: 361 acaacacattccatggaagaggcagaagtcctatgtgatcggttgggaatatttgtagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 acaacacattccatggaagaggcagaagtcctatgtgatcggttgggaatatttgtagat 432
Query: 421 ggtagcttgcagtgcataggaaatccaaaggagctgaaaggcaggtatggaggaacttat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ggtagcttgcagtgcataggaaatccaaaggagctgaaaggcaggtatggaggaacttat 492
Query: 481 gtgttcacgatgacaacatctgtgaatcatgaaaaggatgttgagaacttggtgcagaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gtgttcacgatgacaacatctgtgaatcatgaaaaggatgttgagaacttggtgcagaag 552
Query: 541 ctttccccaaatgctaacaagatttatcatatctctggtactcagaagtttgagttgcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ctttccccaaatgctaacaagatttatcatatctctggtactcagaagtttgagttgcca 612
Query: 601 aaagacgatgttagaatagggagtgtattccaagctgttgaaactgcaaagagaaacttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aaagacgatgttagaatagggagtgtattccaagctgttgaaactgcaaagagaaacttc 672
Query: 661 acagtttctgcatggggtttagctgacaccacactggaagatgtcttcattaaggttgca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 acagtttctgcatggggtttagctgacaccacactggaagatgtcttcattaaggttgca 732
Query: 721 cgtggggctaaggcatttgacatcttgtcataa 753
|||||||||||||||||||||||||||||||||
Sbjct: 733 cgtggggctaaggcatttgacatcttgtcataa 765
>gnl|LJGI|TC72727 similar to UniRef100_A7QI68 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 554
Score = 424 bits (214), Expect = e-118
Identities = 229/234 (97%)
Strand = Plus / Plus
Query: 520 gttgagaacttggtgcagaagctttccccaaatgctaacaagatttatcatatctctggt 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgagaacttggtgcagaagctttccccaaatgctaacaagatttatcatatctctggt 60
Query: 580 actcagaagtttgagttgccaaaagacgatgttagaatagggagtgtattccaagctgtt 639
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 actcagaagtttgagttgccaaaagacgatgttagaatagggagtgtattccgggctgtt 120
Query: 640 gaaactgcaaagagaaacttcacagtttctgcatggggtttagctgacaccacactggaa 699
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 121 gaaactgcaaagagaaacttcacagtttctgcatggggtttagctgataccacactggaa 180
Query: 700 gatgtcttcattaaggttgcacgtggggctaaggcatttgacatcttgtcataa 753
||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 181 gatgtcttcattaaggttgcacgcggggctaaggcatttgacatctagtcataa 234
>gnl|LJGI|TC63647 similar to UniRef100_A7QI68 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 1143
Score = 341 bits (172), Expect = 4e-93
Identities = 331/384 (86%)
Strand = Plus / Plus
Query: 70 agagagcacctgctcttttatggcagacttaaaaatctgaaaggttcagccttaaaacag 129
||||||||||| || ||||||||||||||||||||||| ||||||| | ||| | |||
Sbjct: 8 agagagcacctacttttttatggcagacttaaaaatcttaaaggtttggtcttgacacaa 67
Query: 130 gcagtggaagaatctttgaaaagtgtaaatctttttcacggaggagttgctgctaaacaa 189
||||| |||||||||||||| ||| |||| ||||| || ||||| ||||||| |||||||
Sbjct: 68 gcagtagaagaatctttgaagagtttaaaccttttccatggaggggttgctgataaacaa 127
Query: 190 gctggaaagtacagcggcggaatgaagaggaggcttagtgttgcaatttcattaatcgga 249
||||| || ||||| || || |||||||||||||||| ||| ||||||||||| || ||
Sbjct: 128 gctggcaaatacagtggagggatgaagaggaggcttattgtcgcaatttcattgattggg 187
Query: 250 gatcctagagttgtttatatggatgagcccagtactggattagacccagcatcaagaaac 309
||||| ||||||||||||||||||||||| ||||| || |||||||| || ||||| ||
Sbjct: 188 gatcccagagttgtttatatggatgagccaagtaccgggttagaccctgcttcaaggaaa 247
Query: 310 agcttatggaatgttgttaagcgtgctaaacaaaatcgcgcaatcattctcacaacacat 369
|||||||||||||||||||||| ||| |||| | || |||||||| || || ||||||
Sbjct: 248 agcttatggaatgttgttaagcttgcaaaacgggaccgtgcaatcatcctgaccacacat 307
Query: 370 tccatggaagaggcagaagtcctatgtgatcggttgggaatatttgtagatggtagcttg 429
||||||||||||||||||| | |||||||||| || ||||| |||||| |||||||||||
Sbjct: 308 tccatggaagaggcagaagccttatgtgatcgattaggaatttttgtaaatggtagcttg 367
Query: 430 cagtgcataggaaatccaaaggag 453
|||||| |||||||| ||||||||
Sbjct: 368 cagtgcgtaggaaatgcaaaggag 391
Score = 242 bits (122), Expect = 3e-63
Identities = 254/298 (85%)
Strand = Plus / Plus
Query: 452 agctgaaaggcaggtatggaggaacttatgtgttcacgatgacaacatctgtgaatcatg 511
||||||||||||| || |||||||||||||| |||||||||||||||||| |||| |
Sbjct: 633 agctgaaaggcagatacggaggaacttatgtcttcacgatgacaacatcttccgatcacg 692
Query: 512 aaaaggatgttgagaacttggtgcagaagctttccccaaatgctaacaagatttatcata 571
| | ||| || |||||| ||||| |||||| |||||||||| |||||||| || |||
Sbjct: 693 agagggaagtggagaacctggtgatgaagctcaccccaaatgccaacaagatataccatc 752
Query: 572 tctctggtactcagaagtttgagttgccaaaagacgatgttagaatagggagtgtattcc 631
|||||||||| |||||||||||| |||||||||| || |||||||||| ||||||||
Sbjct: 753 tctctggtacccagaagtttgagctgccaaaagaggaggttagaatagctgatgtattcc 812
Query: 632 aagctgttgaaactgcaaagagaaacttcacagtttctgcatggggtttagctgacacca 691
||| || ||| ||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 813 gagcagtggaagctgcaaagaagaacttcactgtttctgcatggggtttagctgacacca 872
Query: 692 cactggaagatgtcttcattaaggttgcacgtggggctaaggcatttgacatcttgtc 749
|| |||||||||| ||||| |||||||||| || |||| |||||||||| | ||||||
Sbjct: 873 cattggaagatgttttcatcaaggttgcacatgaggctcaggcatttgataccttgtc 930
>gnl|LJGI|TC80520 similar to UniRef100_A7QI68 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 581
Score = 159 bits (80), Expect = 3e-38
Identities = 245/294 (83%), Gaps = 5/294 (1%)
Strand = Plus / Plus
Query: 452 agctgaaaggcaggtatggaggaacttatgtgttcacgatgacaacatctgtgaatcatg 511
||||||||| ||| || ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 36 agctgaaagncagatacggaggaacttatgtgttcacgatgacaacatcttcagatcatg 95
Query: 512 aaaaggatgttgagaacttggtgcagaagctttccccaaatgctaacaagatttatcata 571
| | ||| || |||| | ||||| |||||| |||||||||| |||||||| || |||
Sbjct: 96 agagggaagtggagagcctggtgatgaagctcaccccaaatgccaacaagatataccatc 155
Query: 572 tctctggtactcagaagtttgagttgccaaaagacgatgttagaatagggagtgtattcc 631
|||||||||| |||||||||||| |||| ||||| || ||||||| | ||||||||
Sbjct: 156 tctctggtacccagaagtttgagctgccnaaagaggagtttagaattgctgatgtattcc 215
Query: 632 aagc-tgttgaaactgc-aaagagaaacttcac-agtttctgcatggggtttagct-gac 687
||| || ||| |||| ||||| |||||||| ||||||||||||||||||||| |||
Sbjct: 216 gagcaggtggaagctgcaaaagaagaacttcactggtttctgcatggggtttagctggac 275
Query: 688 accaca-ctggaagatgtcttcattaaggttgcacgtggggctaaggcatttga 740
|||||| |||||||||| ||||| ||||||||||||| |||| ||||||||||
Sbjct: 276 accacatgtggaagatgttttcatcaaggttgcacgtgaggctcaggcatttga 329