Miyakogusa Predicted Gene
- Lj4g3v1614790.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1614790.2 Non Chatacterized Hit- tr|I1MTQ6|I1MTQ6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6971
PE=,64.36,0,seg,NULL; P-loop containing nucleoside triphosphate
hydrolases,NULL; no description,NULL; SUBFAMILY ,CUFF.49490.2
(1950 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69151 similar to UniRef100_A7QI55 Cluster: Chromosome... 926 0.0
gnl|LJGI|TC60262 similar to UniRef100_Q9FM17 Cluster: Similarity... 739 0.0
gnl|LJGI|FS361716 similar to UniRef100_A7QI55 Cluster: Chromosom... 505 e-142
gnl|LJGI|BP052276 133 5e-30
gnl|LJGI|TC80671 similar to UniRef100_Q8DJZ6 Cluster: Photosyste... 58 2e-07
>gnl|LJGI|TC69151 similar to UniRef100_A7QI55 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 815
Score = 926 bits (467), Expect = 0.0
Identities = 467/467 (100%)
Strand = Plus / Plus
Query: 1484 gggatgatgcaggtcctgtaaaggatggaaaaagatggagtgctgaagaggaacatgtaa 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggatgatgcaggtcctgtaaaggatggaaaaagatggagtgctgaagaggaacatgtaa 60
Query: 1544 tggaagtcagagaattgggtaaaagcaaatggtcagaagattttgctgaagatgacattg 1603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggaagtcagagaattgggtaaaagcaaatggtcagaagattttgctgaagatgacattg 120
Query: 1604 ttcacactgaaggtatgaagggcaatattaatgctctttctgggttaattcatcaatatg 1663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcacactgaaggtatgaagggcaatattaatgctctttctgggttaattcatcaatatg 180
Query: 1664 gcaaggaacaaaaatctgtacattggggtgaccaggctggcaatacagggttttcaattg 1723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcaaggaacaaaaatctgtacattggggtgaccaggctggcaatacagggttttcaattg 240
Query: 1724 gctctgccaggaaggtaaatgctttgtctttagtgattggacctggtgctggatacaacc 1783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctctgccaggaaggtaaatgctttgtctttagtgattggacctggtgctggatacaacc 300
Query: 1784 tgaacacaaatccattaccacaagaggatagttcaacccgtaatagtgcagagccaaaga 1843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgaacacaaatccattaccacaagaggatagttcaacccgtaatagtgcagagccaaaga 360
Query: 1844 agaacaacacatttcaagatcgaatccgggctgaacgtgaatctttcaaagctgtttttg 1903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agaacaacacatttcaagatcgaatccgggctgaacgtgaatctttcaaagctgtttttg 420
Query: 1904 acaggagacggcaccggattggtggtcttaatgtggaggatgattga 1950
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acaggagacggcaccggattggtggtcttaatgtggaggatgattga 467
>gnl|LJGI|TC60262 similar to UniRef100_Q9FM17 Cluster: Similarity to nuclear protein
ZAP; n=1; Arabidopsis thaliana|Rep: Similarity to
nuclear protein ZAP - Arabidopsis thaliana (Mouse-ear
cress), partial (7%)
Length = 788
Score = 739 bits (373), Expect = 0.0
Identities = 373/373 (100%)
Strand = Plus / Plus
Query: 312 gcaacaacaacctaatcaaaacgggtttcattccgattctcatcttcactacccattgcg 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gcaacaacaacctaatcaaaacgggtttcattccgattctcatcttcactacccattgcg 475
Query: 372 tggaattcatcatcctcatcaacaaggaccttattaccatgaacacgcacaaccccacga 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tggaattcatcatcctcatcaacaaggaccttattaccatgaacacgcacaaccccacga 535
Query: 432 ttttcgtccctctatcaatgaatcactgcatgcgcacgaggctaattttcctccaaatca 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ttttcgtccctctatcaatgaatcactgcatgcgcacgaggctaattttcctccaaatca 595
Query: 492 gaagctgaatgggcactatcactatccttaccctcctggaagcagtggcagtttttctga 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gaagctgaatgggcactatcactatccttaccctcctggaagcagtggcagtttttctga 655
Query: 552 gaacatgggtcaaatggaaggttcaagattcttcaggggccagcctcctcttccttcttc 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gaacatgggtcaaatggaaggttcaagattcttcaggggccagcctcctcttccttcttc 715
Query: 612 gccaccgcctccacttccaatggatccacccatgaaagcatacttttctccacccaagca 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 gccaccgcctccacttccaatggatccacccatgaaagcatacttttctccacccaagca 775
Query: 672 gccaccttctctt 684
|||||||||||||
Sbjct: 776 gccaccttctctt 788
Score = 509 bits (257), Expect = e-143
Identities = 257/257 (100%)
Strand = Plus / Plus
Query: 1 atggatcatcaatggcgtcccaatcccagaccaattcaattccaacccaatgtgtgtcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 atggatcatcaatggcgtcccaatcccagaccaattcaattccaacccaatgtgtgtcct 164
Query: 61 acctgctcaatctcacacttccccttttgccctcccccaccgttcacctctcacccttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 acctgctcaatctcacacttccccttttgccctcccccaccgttcacctctcacccttgc 224
Query: 121 tggccgccgcaccaccccaattatcacctcgccgacgccgatagaaacttcaagcgaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tggccgccgcaccaccccaattatcacctcgccgacgccgatagaaacttcaagcgaccc 284
Query: 181 agaatcatcgacgaacctttctccgaagacgagcggagattgaagctgattcgcgatcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 agaatcatcgacgaacctttctccgaagacgagcggagattgaagctgattcgcgatcac 344
Query: 241 ggtctcaaccctccgca 257
|||||||||||||||||
Sbjct: 345 ggtctcaaccctccgca 361
>gnl|LJGI|FS361716 similar to UniRef100_A7QI55 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 670
Score = 505 bits (255), Expect = e-142
Identities = 255/255 (100%)
Strand = Plus / Minus
Query: 1696 caggctggcaatacagggttttcaattggctctgccaggaaggtaaatgctttgtcttta 1755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 caggctggcaatacagggttttcaattggctctgccaggaaggtaaatgctttgtcttta 440
Query: 1756 gtgattggacctggtgctggatacaacctgaacacaaatccattaccacaagaggatagt 1815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gtgattggacctggtgctggatacaacctgaacacaaatccattaccacaagaggatagt 380
Query: 1816 tcaacccgtaatagtgcagagccaaagaagaacaacacatttcaagatcgaatccgggct 1875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tcaacccgtaatagtgcagagccaaagaagaacaacacatttcaagatcgaatccgggct 320
Query: 1876 gaacgtgaatctttcaaagctgtttttgacaggagacggcaccggattggtggtcttaat 1935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gaacgtgaatctttcaaagctgtttttgacaggagacggcaccggattggtggtcttaat 260
Query: 1936 gtggaggatgattga 1950
|||||||||||||||
Sbjct: 259 gtggaggatgattga 245
>gnl|LJGI|BP052276
Length = 206
Score = 133 bits (67), Expect = 5e-30
Identities = 169/187 (90%), Gaps = 16/187 (8%)
Strand = Plus / Minus
Query: 1732 aggaaggtaaatgctttgtctttagtgattggacctggtgctggata-caacctgaacac 1790
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 206 aggaaggtaaatgctttgtctttagtgattggacctggtgctggataccaacctgaacac 147
Query: 1791 -aaatccattacca-caagagga-tagttcaacccg-taat-agt-gcagagcc--aaag 1842
| ||||||||||| |||||||| |||||||||||| |||| ||| |||||||| ||||
Sbjct: 146 gagatccattaccaccaagaggattagttcaacccgttaataagtngcagagccaaaaag 87
Query: 1843 aagaacaac-acatttcaaga--tcgaatcc--gggctgaac-gtgaatcttt-caaagc 1895
||||||||| ||||||||||| |||||||| || |||||| |||||||||| ||||||
Sbjct: 86 aagaacaacnacatttcaagatttcgaatcctgggnctgaacngtgaatctttccaaagc 27
Query: 1896 tgttttt 1902
|||||||
Sbjct: 26 tgttttt 20
>gnl|LJGI|TC80671 similar to UniRef100_Q8DJZ6 Cluster: Photosystem II reaction center
protein I; n=2; Chroococcales|Rep: Photosystem II
reaction center protein I - Synechococcus elongatus
(Thermosynechococcus elongatus), partial (34%)
Length = 544
Score = 58.0 bits (29), Expect = 2e-07
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 1897 gtttttgacaggagacggcaccggattggtggtcttaatgtggaggatg 1945
|||||||||| || ||| |||| |||||||||||||| |||||||||||
Sbjct: 1 gtttttgacatgaaacgacaccagattggtggtcttattgtggaggatg 49