Miyakogusa Predicted Gene
- Lj4g3v1614530.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1614530.3 tr|A9T6B9|A9T6B9_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,73.68,1e-18,SUBFAMILY NOT NAMED,NULL; ALR/ERV,NULL;
FAD-dependent thiol oxidase,Erv1/Alr; Evr1_Alr,Erv1/Alr; no
,CUFF.49547.3
(525 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71423 similar to UniRef100_A7QL51 Cluster: Chromosome... 704 0.0
gnl|LJGI|DC596005 similar to UniRef100_Q42599 Cluster: NADH dehy... 100 2e-20
gnl|LJGI|AV414154 similar to UniRef100_Q7V4A3 Cluster: 1,4-dihyd... 92 4e-18
>gnl|LJGI|TC71423 similar to UniRef100_A7QL51 Cluster: Chromosome chr3 scaffold_117,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_117, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 587
Score = 704 bits (355), Expect = 0.0
Identities = 391/403 (97%)
Strand = Plus / Plus
Query: 123 aaaaacaacatcttctctacaatctggcgataacatcctcaagggaaagtctgctccccc 182
|||||||||||| ||| ||||| |||| |||||||||||| |||||||||||||||||||
Sbjct: 1 aaaaacaacatcgtctgtacaacctggtgataacatcctccagggaaagtctgctccccc 60
Query: 183 cgtgactaaagaagagcttgggaaggcaacatggacttttcttcacactcttgctgctca 242
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgtgactaaagaagagcttgggagggcaacatggacttttcttcacactcttgctgctca 120
Query: 243 gtatccagataatcctacaagacaacagaagaaggatgtcaaagaacatgtacagatctt 302
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 121 gtatccagataatcctacaagacagcagaagaaggatgtcaaagaacttgtacagatctt 180
Query: 303 gacgcgattgtacccttgcaaggaatgcgcagatcactttaaagaagttcttagagcaaa 362
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtcgcgattgtacccttgcaaggaatgcgcagatcactttaaagaagttcttagagcaaa 240
Query: 363 tcctgtccaggctgagtcgcatgctcatttttctcattggctatgtcatgtgcataatgt 422
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 241 tcctgtacaggctgagtcgcatgctcaattttctcattggctatgtcatgtgcataatgt 300
Query: 423 tgtcaatagaagccttggtaaaccggtatttccctgcgaaagagttgatgcaaggtgggg 482
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtcaatagaagccttggcaaaccggtatttccctgcgaaagagttgatgcaaggtgggg 360
Query: 483 caaactggagtgtgagcagaaagcatgtgaaattattggaagc 525
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caaactggagtgtgagcagaaagcatgtgaaattattggaagc 403
>gnl|LJGI|DC596005 similar to UniRef100_Q42599 Cluster: NADH dehydrogenase
[ubiquinone] iron-sulfur protein 8 mitochondrial
precursor; n=2;, partial (6%)
Length = 556
Score = 99.6 bits (50), Expect = 2e-20
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 1 atgtctgagaatcatccacttcaggccttgtttcatagctttgaccatgtctccaatttc 60
||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||
Sbjct: 361 atgtctgagaatcatccacttcaggccttgtttcatagcattgagcatgtctcgaatttc 420
Query: 61 gt 62
||
Sbjct: 421 gt 422
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 1 atgtctgagaatcatccacttcaggccttgtttcatagctttgaccatgtctccaatttc 60
||||||||||||||||||||||||||||||||||||| | |||| |||||||| ||||||
Sbjct: 139 atgtctgagaatcatccacttcaggccttgtttcataacattgatcatgtctcgaatttc 198
Query: 61 gt 62
||
Sbjct: 199 gt 200
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 102 ctccatcaaagccccacttgcaaaaacaacatcttctctacaatctggcgataacatcct 161
||||||||||||||||||||||||| |||||||||| ||||| |||| |||||||||||
Sbjct: 285 ctccatcaaagccccacttgcaaaattaacatcttctgtacaacctggtgataacatcct 344
Query: 162 caag 165
||||
Sbjct: 345 caag 348
>gnl|LJGI|AV414154 similar to UniRef100_Q7V4A3 Cluster: 1,4-dihydroxy-2-naphthoate
(DHNA) octaprenyltransferase; UbiA prenyltranferase
family; n=1; Prochlorococcus marinus str. MIT 9313|Rep:
1,4-dihydroxy-2-naphthoate (DHNA) octaprenyltransferase;
UbiA prenyltranferase family - Prochlorococcus marinus
(strain MIT 9313), partial (5%)
Length = 278
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 1 atgtctgagaatcatccacttcaggccttgtttcatagctttgaccatgtctccaatttc 60
||||||||||||||||||||||||||||||||||||| | |||| |||||||| ||||||
Sbjct: 217 atgtctgagaatcatccacttcaggccttgtttcataacattgatcatgtctcgaatttc 276
Query: 61 gt 62
||
Sbjct: 277 gt 278