Miyakogusa Predicted Gene

Lj4g3v1604510.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1604510.2 Non Chatacterized Hit- tr|I1MLU6|I1MLU6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45053
PE,74.15,0,seg,NULL; NEUROTR_ION_CHANNEL,Neurotransmitter-gated
ion-channel, conserved site; POP1,Ribonuclease ,CUFF.49544.2
         (2547 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70344 weakly similar to UniRef100_A7PJ62 Cluster: Chr...   381   e-104

>gnl|LJGI|TC70344 weakly similar to UniRef100_A7PJ62 Cluster: Chromosome chr12
            scaffold_18, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (13%)
          Length = 578

 Score =  381 bits (192), Expect = e-104
 Identities = 213/220 (96%)
 Strand = Plus / Plus

                                                                        
Query: 2328 tatgaaattatacttcaaagagcattcctctggtaaatggggaatgcagataccagagga 2387
            ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1    tatgagattatacttcaaagagcattcctctggtaattggggaatgcagataccagagga 60

                                                                        
Query: 2388 ttcaattgccagagcgtctcaccggtggcctattggctttgtcacaacagcttcggttca 2447
            |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 61   ttcaattgccagagcgtctcaccgatggcctattggctttgtcacaacagcttcagttca 120

                                                                        
Query: 2448 aggaagcaagaggctcgtagcagagggattttgtgaggcagttttactgtctcatttaag 2507
            ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 121  aggaagcaagaggctagtagcagagggattttgcgaggcagttttactgtctcatttaag 180

                                                    
Query: 2508 agaggaacagtggaaggagatgcctgtgaaacaaaggagg 2547
            ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 181  agaggaacagtggaaggagttgcctgtgaaacaaaggagg 220