Miyakogusa Predicted Gene
- Lj4g3v1600410.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1600410.1 Non Chatacterized Hit- tr|I1MTQ0|I1MTQ0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18805
PE,77.49,0,ZF_RING_2,Zinc finger, RING-type; ZF_CHY,Zinc finger,
CHY-type; ZF_CTCHY,Zinc finger, CTCHY-type; se,CUFF.49476.1
(3678 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69912 similar to UniRef100_A7QI26 Cluster: Chromosome... 1877 0.0
gnl|LJGI|BP054978 similar to UniRef100_A7QI26 Cluster: Chromosom... 184 3e-45
gnl|LJGI|BP062483 similar to UniRef100_A7QI26 Cluster: Chromosom... 131 3e-29
gnl|LJGI|TC71386 similar to UniRef100_A7PGW1 Cluster: Chromosome... 56 2e-06
>gnl|LJGI|TC69912 similar to UniRef100_A7QI26 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 1281
Score = 1877 bits (947), Expect = 0.0
Identities = 956/959 (99%)
Strand = Plus / Plus
Query: 2720 acaagcatgcccgcaacgaagtgccaggtatcacaaatccaatatgcaaagaagttgagt 2779
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 acaaacatgcccgcaacgaagtgacaggtatcacaaatccaatatgcaaagaagttgagt 60
Query: 2780 cttttcaattaggtgacaagtctgggcattatgaccgacttctgaaattgagtcaacatg 2839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttttcaattaggtgacaagtctgggcattatgaccgacttctgaaattgagtcaacatg 120
Query: 2840 agctggaagtggtgataagaagggtatctagtgactcttgcctagatcctcagaaaaagc 2899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agctggaagtggtgataagaagggtatctagtgactcttgcctagatcctcagaaaaagc 180
Query: 2900 catacataatacagacattacaaatgagccgttggattattagccaacagatctcttcta 2959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catacataatacagacattacaaatgagccgttggattattagccaacagatctcttcta 240
Query: 2960 cagaattctatatcaaaagcgagggacaggaatttcctgggaagcatccatcttacaggg 3019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagaattctatatcaaaagcgagggacaggaatttcctgggaagcatccatcttacaggg 300
Query: 3020 accctctcaaactaatccatggttgcaaacactacaagagaaactgtaagcttttagctc 3079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 accctctcaaactaatccatggttgcaaacactacaagagaaactgtaagcttttagctc 360
Query: 3080 cctgctgcaaccaacttcatacttgcatacgttgccataatgaggtatcagatcattcaa 3139
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 361 cctgctgcaaccaacttcatacttgcatacattgccataatgaggtatcagatcattcaa 420
Query: 3140 tcgacagaaaatctattacaaagatgatgtgtatgaagtgcttgatgattcaaccaatta 3199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcgacagaaaatctattacaaagatgatgtgtatgaagtgcttgatgattcaaccaatta 480
Query: 3200 gtgctacatgctcaacagtttcttgtggtaatttgtccatggcgaaatattactgcagga 3259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtgctacatgctcaacagtttcttgtggtaatttgtccatggcgaaatattactgcagga 540
Query: 3260 tatgcaaattgtttgatgatgaaaggcaaatttaccactgtccctattgcaacctgtgcc 3319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tatgcaaattgtttgatgatgaaaggcaaatttaccactgtccctattgcaacctgtgcc 600
Query: 3320 gagttggaaagggtttgggtgtagaatactttcactgtatgaattgcaatgcttgcatgg 3379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gagttggaaagggtttgggtgtagaatactttcactgtatgaattgcaatgcttgcatgg 660
Query: 3380 gtcgtactcttatgattcatacatgcagggagaaatctttagaggataactgtccaattt 3439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtcgtactcttatgattcatacatgcagggagaaatctttagaggataactgtccaattt 720
Query: 3440 gtcatgaatatatcttcacatcctgctctccagtaaaagccctcccatgtggtcatgtga 3499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtcatgaatatatcttcacatcctgctctccagtaaaagccctcccatgtggtcatgtga 780
Query: 3500 tgcactcaacatgttttcaggaatatacctgcttcaactatacctgcccaatatgtagca 3559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgcactcaacatgttttcaggaatatacctgcttcaactatacctgcccaatatgtagca 840
Query: 3560 agtcacttggaaacatgcaggtatattttgagatgttagatgcattagtggctgaagaga 3619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 agtcacttggaaacatgcaggtatattttgagatgttagatgcattagtggctgaagaga 900
Query: 3620 aaatttctgatgagctttctggtcaaactcaggttatattatgtaatgactgtgaaaag 3678
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aaatttctgatgagctttctggtcaaactcaggttatattatgtaatgactgtgaaaag 959
>gnl|LJGI|BP054978 similar to UniRef100_A7QI26 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 507
Score = 184 bits (93), Expect = 3e-45
Identities = 93/93 (100%)
Strand = Plus / Minus
Query: 3561 gtcacttggaaacatgcaggtatattttgagatgttagatgcattagtggctgaagagaa 3620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gtcacttggaaacatgcaggtatattttgagatgttagatgcattagtggctgaagagaa 448
Query: 3621 aatttctgatgagctttctggtcaaactcaggt 3653
|||||||||||||||||||||||||||||||||
Sbjct: 447 aatttctgatgagctttctggtcaaactcaggt 415
Score = 60.0 bits (30), Expect = 1e-07
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 3649 caggttatattatgtaatgactgtgaaaag 3678
||||||||||||||||||||||||||||||
Sbjct: 320 caggttatattatgtaatgactgtgaaaag 291
>gnl|LJGI|BP062483 similar to UniRef100_A7QI26 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 378
Score = 131 bits (66), Expect = 3e-29
Identities = 75/78 (96%)
Strand = Plus / Minus
Query: 3601 gcattagtggctgaagagaaaatttctgatgagctttctggtcaaactcaggttatatta 3660
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 378 gcattagtggctgaagagaaaatttctgatgagctttgtggtcaaactcaggttatatga 319
Query: 3661 tgtaatgactgtgaaaag 3678
||| ||||||||||||||
Sbjct: 318 tgtgatgactgtgaaaag 301
>gnl|LJGI|TC71386 similar to UniRef100_A7PGW1 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (86%)
Length = 4206
Score = 56.0 bits (28), Expect = 2e-06
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 3238 atggcgaaatattactgcaggatatgcaaattgtttgatgatgaaagg 3285
||||| ||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 3375 atggcaaaatatttctgcaatatatgcaaattttttgatgatgaaagg 3422