Miyakogusa Predicted Gene

Lj4g3v1599320.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1599320.1 Non Chatacterized Hit- tr|G7JCA6|G7JCA6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,35.71,5e-18,FAMILY NOT NAMED,NULL; coiled-coil,NULL;
seg,NULL,CUFF.49460.1
         (1374 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AI967639 similar to UniRef100_Q2PF39 Cluster: Aminoacyl...   291   6e-78

>gnl|LJGI|AI967639 similar to UniRef100_Q2PF39 Cluster: Aminoacyl-tRNA synthetase; n=1;
            Trifolium pratense|Rep: Aminoacyl-tRNA synthetase -
            Trifolium pratense (Red clover), partial (9%)
          Length = 306

 Score =  291 bits (147), Expect = 6e-78
 Identities = 157/159 (98%), Gaps = 1/159 (0%)
 Strand = Plus / Plus

                                                                        
Query: 849  cgatgacgacgacttgagcatcagtgaggatagtgatagtgacaaaccccgcaaagttaa 908
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148  cgatgacgacgacttgagcatcagtgaggatagtgatagtgacaaaccccgcaaagttaa 207

                                                                        
Query: 909  acaattgccaggtcgtactaggagggaaactaaacggaggtctgttgatgagattcaatc 968
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208  acaattgccaggtcgtactaggagggaaactaaacggaggtctgttgatgagattcaatc 267

                                                   
Query: 969  aggtctaagacgca-gtaagagggcaactagaaatacta 1006
            ||||||||||||||  |||||||||||||||||||||||
Sbjct: 268  aggtctaagacgcacctaagagggcaactagaaatacta 306



 Score =  131 bits (66), Expect = 1e-29
 Identities = 66/66 (100%)
 Strand = Plus / Plus

                                                                       
Query: 702 agaggttgtgtatgatgaagaatatcttaagaaacgtaagcagagaagggatatttctag 761
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agaggttgtgtatgatgaagaatatcttaagaaacgtaagcagagaagggatatttctag 60

                 
Query: 762 tagctc 767
           ||||||
Sbjct: 61  tagctc 66